Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq9558 150 7e-32 >seq9558 Length=35122 Score = 150 bits (166), Expect = 7e-32 Identities = 293/427 (69%), Gaps = 8/427 (2%) Strand=Plus/Plus Query 51914 CGGCGTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGG 51973 |||| || ||| ||| |||||||||| || | || ||||||| || || || || Sbjct 75 CGGCTGCACCATCTGGAACGAATGGGCACGCGAGGACGGCGACCTGGGCCCGGTCTACGG 134 Query 51974 TAAGCAGTGGCGTAGTTGGG--ATGCTGGT-GGCGGCAAGGTCATCGATCAGATCCATGA 52030 ||| ||||| | ||| | || || |||||| | |||||| |||||| || Sbjct 135 CGTGCAATGGCGCAACTGGCCCACGCCGGACGGCGGCCA---CATCGACCAGATCGCCGA 191 Query 52031 AGTCGTCAAATCAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAA 52090 ||| ||||| | |||| | | || || || || || ||| ||| || ||||| Sbjct 192 AGTGGTCAAGCAGCTCAAGAGCAACCCGGACAGCCGCCGCATCATCGTCAGCGCCTGGAA 251 Query 52091 TGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGT 52150 |||| || || | |||||| | |||||||| | | ||||| |||||||| Sbjct 252 CGTGGCCGACCTGCCGCAGATGGCGCTCATGCCCTGCCACGCCTTCTTCCAGTTCTATGT 311 Query 52151 AGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGT 52210 || || || ||||| ||||| |||| ||||| || ||||| ||| ||||||| Sbjct 312 GGCCGACGGCAAGCTCAGTTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGT 371 Query 52211 TCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGTTGGCCT 52270 ||| || ||||| |||||||| | |||||||| || || | || | |||| | | | Sbjct 372 TCCCTTCAACATCGCCAGCTACGCATTGCTGACCCACATGCTGGCCC-AGCAATGCGACC 430 Query 52271 TG-ATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAG 52329 || | || ||||| ||| | ||||| || |||||| ||| ||||||||||||||| | | Sbjct 431 TGCAGGTGGGTGACTTCGTCTGGACCGGCGGCGACTGCCACATCTACAACAACCATTTCG 490 Query 52330 ATCAGGT 52336 ||||| Sbjct 491 CCCAGGT 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190071611158440