Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq10485 134 3e-26 seq10777 131 4e-25 seq10493 107 4e-18 >seq10485 Length=261005 Score = 134 bits (148), Expect = 3e-26 Identities = 158/210 (75%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAG-TTCTCCCATCTTCT 151955 |||| |||||||| |||||||| ||||||||||| ||| |||| | ||| ||||||||| Sbjct 97868 CAAG-TGAAGAGTCGACTCTTTCTGGATGTTGTAGTCG-CTAAGGGTTCGGCCATCTTCT 97811 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||| ||||||||||| || | || ||||| | | || |||||||| |||||| Sbjct 97810 AGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGA 97751 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 ||||| ||| ||| |||| | |||| || ||||| ||||| || ||||| Sbjct 97750 ATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGTTTTC 97691 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || |||||||| |||| |||||| Sbjct 97690 CCGGTCAGGGTCTTCACAAAGATTTGCATT 97661 Score = 129 bits (142), Expect = 1e-24 Identities = 157/210 (75%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAG-TTCTCCCATCTTCT 151955 |||| |||||||| |||||||| ||||||||||| ||| |||| | ||| |||||||| Sbjct 98096 CAAG-TGAAGAGTCGACTCTTTCTGGATGTTGTAGTCG-CTAAGGGTTCGGCCATCTTCG 98039 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||| ||||||||||| | | ||| ||||| | | || |||||||| |||||| Sbjct 98038 AGTTGTTTTCCGGCGAAGATGAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGA 97979 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 ||||| ||| ||| |||| | |||| || ||||| ||||| || ||||| Sbjct 97978 ATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGTTTTC 97919 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || |||||||| |||| |||||| Sbjct 97918 CCGGTCAGGGTCTTCACAAAGATTTGCATT 97889 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | || || || ||||| || |||||||| ||||||||||| ||| | ||| Sbjct 97654 CTGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTT 97595 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| || ||| || ||||| || | | ||| ||||| | | || ||| Sbjct 97594 CGGCCATCTTCGAGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCT 97535 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||||||||| ||| ||| | || | | || | ||| ||||| || Sbjct 97534 TCCTTGTCTTGAATTTTAGCTTTCACATTTTCGATCGTATCGCTAGGCTCAACTTCTAGG 97475 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| ||||| ||||| || ||||| |||| |||||| Sbjct 97474 GTGATAGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCATT 97433 >seq10777 Length=1546546 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || ||||| || |||||||| ||||||||||| ||| || |||| |||||| Sbjct 767677 AGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTTAGGGTTCGGCCATCT 767618 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| |||||||| || | | ||| ||||| | | || |||||||| ||| Sbjct 767617 TCAAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCT 767558 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| ||| ||| |||| | |||| | ||| ||||| || || |||||| Sbjct 767557 TGAATTTTCGCTTTTACATTCTCGATCGTGTCACTAGGCTCGACTTCTAGGGTGATAGTT 767498 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || ||||| |||| ||||| Sbjct 767497 TTACCAGTGAGTGTTTTCACAAAGATTTGCAT 767466 >seq10493 Length=264610 Score = 107 bits (118), Expect = 4e-18 Identities = 154/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| || ||||||||||| ||| | || | || ||| Sbjct 49950 AGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCT 49891 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| | ||| |||||||| | | ||| || || || ||| Sbjct 49890 TCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCT 49831 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||| ||| |||| | |||| ||| || ||||| | ||| || Sbjct 49830 TGGATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATG 49774 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || ||||||||||| ||||| | ||||||| Sbjct 49773 GTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49738 Score = 107 bits (118), Expect = 4e-18 Identities = 154/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| || ||||||||||| ||| | || | || ||| Sbjct 50178 AGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCT 50119 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| | ||| |||||||| | | ||| || || || ||| Sbjct 50118 TCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCT 50059 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||| ||| |||| | |||| ||| || ||||| | ||| || Sbjct 50058 TGGATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATG 50002 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || ||||||||||| ||||| | ||||||| Sbjct 50001 GTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49966 Score = 107 bits (118), Expect = 4e-18 Identities = 154/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| || ||||||||||| ||| | || | || ||| Sbjct 50634 AGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCT 50575 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| | ||| |||||||| | | ||| || || || ||| Sbjct 50574 TCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCT 50515 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||| ||| |||| | |||| ||| || ||||| | ||| || Sbjct 50514 TGGATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATG 50458 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || ||||||||||| ||||| | ||||||| Sbjct 50457 GTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 50422 Score = 102 bits (112), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| || ||||||||||| || | || | || ||| Sbjct 49722 AGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTGCGTCCGTCT 49663 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| | ||| |||||||| | | ||| || || || ||| Sbjct 49662 TCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCT 49603 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||| ||| |||| | |||| ||| || ||||| | ||| || Sbjct 49602 TGGATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATG 49546 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || ||||||||||| ||||| | ||||||| Sbjct 49545 GTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49510 Score = 102 bits (112), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| || ||||||||||| ||| | || | || ||| Sbjct 50406 AGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCT 50347 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| | ||| |||||||| | | ||| || || || ||| Sbjct 50346 TCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCT 50287 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||| ||| |||| | |||| ||| || ||||| | ||| || Sbjct 50286 TGGATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATG 50230 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || |||||||| || ||||| | ||||||| Sbjct 50229 GTCTTTCCAGTGAGAGTTTTGACGAAAATCTGCATT 50194 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| || ||||||||||| ||| | || | || ||| Sbjct 50862 AGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCT 50803 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| | |||||| ||||| | | ||| || || || ||| Sbjct 50802 TCAAGTTGCTTGCCGGCAAAGATCAACCTCTGTTGGTCTGGTGGGATACCCTCTTTGTCT 50743 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||| ||| |||| | |||| ||| || ||||| | ||| || Sbjct 50742 TGGATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCAACTTCCAAAGTGATG 50686 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || |||||||| || ||||| | ||||||| Sbjct 50685 GTCTTTCCAGTGAGAGTTTTGACGAAAATCTGCATT 50650 Score = 96.9 bits (106), Expect = 8e-15 Identities = 153/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| || ||||||||||| || | || | || ||| Sbjct 49494 AGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTGCGTCCGTCT 49435 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || |||||||||||||| || || ||||| | || || ||||| || || Sbjct 49434 TCGAGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGCGGAATGCCTTCTTTGTCC 49375 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAATA 152069 |||||||| || ||| | || | | || ||| || || || | ||| || Sbjct 49374 TGAATTTTCGCCTTCACATTTTCGATCGTATC---GCTCGGTTCGACCTCTAAAGTGATG 49318 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || || ||||||||||| |||| |||||| || Sbjct 49317 GTTTTTCCGGTCAGAGTCTTCACAAAGATCTGCATGTT 49280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153661080913484