Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq2361 84.2 7e-12 >seq2361 Length=2839 Score = 84.2 bits (92), Expect = 7e-12 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 36537 AGCTGGCCTTCGATGTAAACCTGCGAACCTTTTCGAAGGTATTCTCCTGCAACTTCCGCA 36596 |||| ||| ||||| || |||||||||||||| || ||||| || || |||| || ||| Sbjct 2054 AGCTTGCCCTCGATATATACCTGCGAACCTTTGCGCAGGTACTCGCCAGCAATCTCGGCA 2113 Query 36597 AGTTTCCCGAATA-TGACAATACGATGCCACTCTGTCTGTTCTTTCTTTTCTCCTGTCTG 36655 | || ||||| | ||| | ||| |||||||| || | || ||| | || ||||| Sbjct 2114 ACCTTGCCGAACAGCGAC-ACACGGTGCCACTCGGTTTTCTCGACCTTCTGGCCAGTCTG 2172 Query 36656 CTTATCTTTCCACTGCTC 36673 ||| || |||||||||| Sbjct 2173 CTTGTCGGTCCACTGCTC 2190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152063688105648