Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq10493 123 2e-23 seq10485 96.9 2e-15 seq10777 95.1 9e-15 >seq10493 Length=264610 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| |||||||| | | ||||| ||||| ||| |||||| ||||||||||| || Sbjct 50653 CATTCCTCCTCTCAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTC 50594 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| |||| || || ||||| ||||| |||||||| | ||||| |||| Sbjct 50593 GCTCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGG 50534 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | ||| || || || ||||| |||| | ||| | || ||||| | || Sbjct 50533 TGGGATACCCTCTTTGTCTTGGATCTT-GGCTTTCACATTCTCAATTGTGTCACTTGGTT 50475 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || |||| || || |||||||| ||||| ||||| ||||| || ||||| Sbjct 50474 CAACTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCAT 50423 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| ||||| ||| |||||| ||||||||||| ||| ||| ||| |||| || Sbjct 49947 ACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCTTCA 49888 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| |||||||| | ||||| |||| || | ||| || || || Sbjct 49887 AGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGG 49828 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | ||| | || ||||| | ||| || |||| || || ||||| Sbjct 49827 ATCTT-GGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTT 49769 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| ||||| ||||| || ||||| Sbjct 49768 TCCAGTGAGAGTCTTGACGAAAATCTGCAT 49739 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| ||||| ||| |||||| ||||||||||| ||| ||| ||| |||| || Sbjct 50175 ACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCTTCA 50116 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| |||||||| | ||||| |||| || | ||| || || || Sbjct 50115 AGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGG 50056 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | ||| | || ||||| | ||| || |||| || || ||||| Sbjct 50055 ATCTT-GGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTT 49997 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| ||||| ||||| || ||||| Sbjct 49996 TCCAGTGAGAGTCTTGACGAAAATCTGCAT 49967 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| ||||| ||| |||||| ||||||||||| ||| ||| ||| |||| || Sbjct 50859 ACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCTTCA 50800 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| |||||||||||||| | ||| || |||| || | ||| || || || Sbjct 50799 AGTTGCTTGCCGGCAAAGATCAACCTCTGTTGGTCTGGTGGGATACCCTCTTTGTCTTGG 50740 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | ||| | || ||||| | ||| || |||| || || ||||| Sbjct 50739 ATCTT-GGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTT 50681 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| || || ||||| || ||||| Sbjct 50680 TCCAGTGAGAGTTTTGACGAAAATCTGCAT 50651 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| ||||| ||| |||||| ||||||||||| || ||| ||| |||| || Sbjct 49719 ACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTGCGTCCGTCTTCA 49660 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| |||||||| | ||||| |||| || | ||| || || || Sbjct 49659 AGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGG 49600 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | ||| | || ||||| | ||| || |||| || || ||||| Sbjct 49599 ATCTT-GGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTT 49541 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| ||||| ||||| || ||||| Sbjct 49540 TCCAGTGAGAGTCTTGACGAAAATCTGCAT 49511 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| ||||| ||| |||||| ||||||||||| ||| ||| ||| |||| || Sbjct 50403 ACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCTTCA 50344 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| |||||||| | ||||| |||| || | ||| || || || Sbjct 50343 AGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGG 50284 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | ||| | || ||||| | ||| || |||| || || ||||| Sbjct 50283 ATCTT-GGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTT 50225 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| || || ||||| || ||||| Sbjct 50224 TCCAGTGAGAGTTTTGACGAAAATCTGCAT 50195 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| ||||| ||| |||||| ||||||||||| || ||| ||| |||| || Sbjct 49491 ACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTGCGTCCGTCTTCG 49432 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||| | | || || || | || | ||||| || ||| Sbjct 49431 AGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGCGGAATGCCTTCTTTGTCCTGA 49372 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || ||| ||||| || | || || ||| | ||| ||||| | || || || ||| Sbjct 49371 ATTTTCGCCTTCACATTTTCGATCGTATCGCTCGGTTCGACCTCTAAAGTGATGGTTTTT 49312 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || || |||||||| ||||| |||||| || Sbjct 49311 CCGGTCAGAGTCTTCACAAAGATCTGCATGTTG 49279 >seq10485 Length=261005 Score = 96.9 bits (106), Expect = 2e-15 Identities = 176/253 (70%), Gaps = 5/253 (2%) Strand=Plus/Minus Query 44089 ATTACATGATT-TTTATTTCA--TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCT 44145 |||||| | || |||| || | |||| ||||| || | | |||| |||||| || Sbjct 98141 ATTACAGGGTTCTTTAGTTTAGTTTCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGA 98082 Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || ||||||||||| ||| || || | || || || || || ||||| || Sbjct 98081 CTCTTTCTGGATGTTGTAGTCGCTAAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAA 98022 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| |||||||| || |||| || | |||||||| | | | | || |||| | | Sbjct 98021 GATGAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGT-CTTGAATTTTAGCTTTCACAT 97963 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || |||||| | ||| || || | || || || || || || |||||||||| Sbjct 97962 TCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCA 97903 Query 44325 CGAAGATTTGCAT 44337 | ||||||||||| Sbjct 97902 CAAAGATTTGCAT 97890 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||| || | | ||||||||||| || ||| || ||||||||||| Sbjct 97667 TTGCATTCCTCCTCTGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTA 97608 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || || | || || || || || || || || || |||||||| || || Sbjct 97607 GTCGCTCAGGGTTCGGCCATCTTCGAGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTC 97548 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | |||||||| || || || |||| || | || || ||| | Sbjct 97547 TGGGGGAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTTTCGATCGTATCGCTAGG 97488 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || || | || || ||||| || ||||| || ||||| ||||||||||| ||| Sbjct 97487 CTCAACTTCTAGGGTGATAGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCATTATG 97430 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||| || | | |||| |||||| || ||| || ||||||||||| Sbjct 97895 TTGCATTCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTA 97836 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || || | || || ||||| || ||||| ||||| | || || || || Sbjct 97835 GTCGCTAAGGGTTCGGCCATCTTCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTC 97776 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | |||||||| | | | | || |||| | ||| | || |||||| | Sbjct 97775 TGGGGGAATGCCTTCCTTGT-CTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTG 97717 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || || || || || ||||||||||| ||||||||||| Sbjct 97716 GTTCAACTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCAT 97662 >seq10777 Length=1546546 Score = 95.1 bits (104), Expect = 9e-15 Identities = 166/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | | ||||||||||| || ||| || ||||||||||| Sbjct 767699 TTGCATTCCTCCTCGGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTA 767640 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || || | || || ||||| || ||||| || || |||||||| || || Sbjct 767639 GTCGCTTAGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTC 767580 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | |||||||| || || ||| |||| | ||| | || ||||| | Sbjct 767579 TGGGGGAATGCCTTCCTTGTCTTGAATTTTC-GCTTTTACATTCTCGATCGTGTCACTAG 767521 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || || | || || || || || ||||| || ||||| ||||||||||||||| Sbjct 767520 GCTCGACTTCTAGGGTGATAGTTTTACCAGTGAGTGTTTTCACAAAGATTTGCATGATG 767462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359942998714068