Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq10485 149 2e-30 seq10777 138 3e-27 seq10493 136 1e-26 seq10798 91.5 4e-13 >seq10485 Length=261005 Score = 149 bits (164), Expect = 2e-30 Identities = 167/222 (75%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| || ||||| || || || || ||||| ||||| || || || ||| ||| Sbjct 97665 CAAATCTTTGTGAAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAGC--- 97721 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| |||||||| || ||| || ||||| ||||| ||||| || || || ||||| Sbjct 97722 GACACAATCGAGAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAA 97781 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 |||||||| |||||||||||||||||||| |||||||| | || ||| ||| || ||| Sbjct 97782 CAACGACTCATCTTCGCCGGAAAACAGCTAGAAGATGGCCGAACCCTTAGCGACTACAAC 97841 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || || || | ||| | | |||||| Sbjct 97842 ATCCAGAAAGAGTCGACTCTTCACTTGGTTCTACGTCTCAGA 97883 Score = 136 bits (150), Expect = 1e-26 Identities = 164/222 (74%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| || ||||| || || || || ||||| ||||| || || || ||| ||| Sbjct 97893 CAAATCTTTGTGAAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAGC--- 97949 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| |||||||| || ||| || ||||| ||||| ||||| || || || ||||| Sbjct 97950 GACACAATCGAGAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAA 98009 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | ||||||||||||||||| ||||||||||| | || ||| ||| || ||| Sbjct 98010 CAGCGTTTCATCTTCGCCGGAAAACAACTCGAAGATGGCCGAACCCTTAGCGACTACAAC 98069 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || || || | ||| | | |||||| Sbjct 98070 ATCCAGAAAGAGTCGACTCTTCACTTGGTTCTACGTCTCAGA 98111 Score = 118 bits (130), Expect = 3e-21 Identities = 160/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| || |||||||| ||||| || || || |||||||| || || || || || Sbjct 97437 CAAATCTTTGTGAAAACACTCACTGGCAAGACTATCACCCTAGAAGTTGA--GCCTAGCG 97494 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | || ||||| || || ||| || ||||| ||||| ||||| || || || ||||| | Sbjct 97495 ATACGATCGAAAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAAC 97554 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | || ||||| || ||||| ||||||||||| | || || ||| || ||| Sbjct 97555 AGCGTTTAATTTTCGCTGGTAAACAACTCGAAGATGGCCGAACCCTGAGCGACTACAACA 97614 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || || || || ||| | | |||||| Sbjct 97615 TCCAGAAAGAGTCGACCCTTCACCTGGTTCTACGTCTCAGA 97655 >seq10777 Length=1546546 Score = 138 bits (152), Expect = 3e-27 Identities = 157/209 (75%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| || |||||||| ||||| || ||||| |||||||| || || || || || Sbjct 767469 CAAATCTTTGTGAAAACACTCACTGGTAAAACTATCACCCTAGAAGTCGA--GCCTAGTG 767526 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||| |||||||| || ||| || ||||| ||||| ||||| || || || ||||| | Sbjct 767527 ACACGATCGAGAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAAC 767586 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | || ||||||||||||||||| |||||||| | || || ||| || ||| Sbjct 767587 AGCGTTTAATTTTCGCCGGAAAACAGCTTGAAGATGGCCGAACCCTAAGCGACTACAACA 767646 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTT 178130 |||| ||||| || || || || || ||| Sbjct 767647 TCCAGAAAGAGTCGACCCTTCACCTGGTT 767675 >seq10493 Length=264610 Score = 136 bits (150), Expect = 1e-26 Identities = 157/210 (75%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || || ||||| ||||| || |||||||| ||||| | ||||| ||| ||| Sbjct 49286 CAGATCTTTGTGAAGACTCTGACCGGAAAAACCATCACTTTAGAGGTCGAACCGAGC--- 49342 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || || ||||| || || || || ||||||||||||||||| || || || ||||| Sbjct 49343 GATACGATCGAAAATGTGAAGGCGAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 49402 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 ||| |||||||||||||||| || || |||||||| ||| | || || || || ||| Sbjct 49403 CAAAGACTTATCTTCGCCGGCAAGCAACTCGAAGACGGACGCACACTGAGTGACTACAAC 49462 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTT 178130 |||| || || || ||||| ||||| ||| Sbjct 49463 ATCCAGAAGGAGTCCACACTTCATCTGGTT 49492 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||||||||| ||||| || ||||| | || || ||| ||| Sbjct 50198 CAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 50257 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||||| || |||||||| || ||||| || ||||||||| Sbjct 50258 ACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAGCAA 50317 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||||||||| || || || ||||| || | || || ||| || ||| || Sbjct 50318 AGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAACATC 50377 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || ||||| ||||| ||| Sbjct 50378 CAGAAGGAGTCCACACTTCATCTGGTT 50404 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| ||||| || ||||| | || || ||| ||| Sbjct 49514 CAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 49573 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||||| || |||||||| || ||||| || ||||||||| Sbjct 49574 ACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAGCAA 49633 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||||||||| || || || ||||| ||| | || || || || ||| || Sbjct 49634 AGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGACGCACACTGAGTGACTACAACATC 49693 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || ||||| ||||| ||| Sbjct 49694 CAGAAGGAGTCCACACTTCATCTGGTT 49720 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| ||||| || ||||| | || || ||| ||| Sbjct 49742 CAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 49801 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||||| || |||||||| || ||||| || ||||||||| Sbjct 49802 ACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAGCAA 49861 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||||||||| || || || ||||| || | || || ||| || ||| || Sbjct 49862 AGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAACATC 49921 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || ||||| ||||| ||| Sbjct 49922 CAGAAGGAGTCCACACTTCATCTGGTT 49948 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| ||||| || ||||| | || || ||| ||| Sbjct 49970 CAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 50029 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||||| || |||||||| || ||||| || ||||||||| Sbjct 50030 ACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAGCAA 50089 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||||||||| || || || ||||| || | || || ||| || ||| || Sbjct 50090 AGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAACATC 50149 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || ||||| ||||| ||| Sbjct 50150 CAGAAGGAGTCCACACTTCATCTGGTT 50176 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| ||||| || ||||| | || || ||| ||| Sbjct 50426 CAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 50485 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||||| || |||||||| || ||||| || ||||||||| Sbjct 50486 ACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAGCAA 50545 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||||||||| || || || ||||| || | || || ||| || ||| || Sbjct 50546 AGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAACATC 50605 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || ||||| ||||| ||| Sbjct 50606 CAGAAGGAGTCCACACTTCATCTGGTT 50632 Score = 116 bits (128), Expect = 9e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||||||||| ||||| || ||||| | || || ||| ||| Sbjct 50654 CAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAGTGAC 50713 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||||| || |||||||| || ||||| || ||||| || Sbjct 50714 ACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCAACAG 50773 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| ||||| || || || ||||| || | || || ||| || ||| || Sbjct 50774 AGGTTGATCTTTGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAACATC 50833 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || ||||| ||||| ||| Sbjct 50834 CAGAAGGAGTCCACACTTCATCTGGTT 50860 >seq10798 Length=2343873 Score = 91.5 bits (100), Expect = 4e-13 Identities = 85/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| || ||||| ||||||||||| |||||||| || || || ||||| |||||||| | Sbjct 1324400 AGGCATTCCTCCAGACCAGCAACGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGTCG 1324459 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || ||| ||| || ||| |||||||||| ||||| || || |||| Sbjct 1324460 TACCCTTAGCGACTACAACATCCAAAAAGAGTCAACCCTACA-CTTG 1324505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203564572003976