Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq74122 91.5 2e-13 >seq74122 Length=500396 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/221 (70%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || ||||||||||| | ||| ||| || || || || ||||| | || || |||||| Sbjct 192223 TCATCTCTGCTGATTAATTCATTGCTGAATGTCAAACCAGGCATGATACCACGCTTCTTT 192164 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCG 16345 |||||||| || |||||||| || || || || || || || || || |||||||| Sbjct 192163 AACCAGAAAATAGCAGCAAAAGAACCAGAGAAAAAGATTCCTTCTACCCCAGCAAAAGCA 192104 Query 16346 ATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCT 16405 | | || || | || | | | | || | | |||||||||| |||| || ||| Sbjct 192103 ACAACACGCTCTGAATA--TGGGA-CCTTGTCAGAAATCCATTTCAAAGCCCAATCAGCT 192047 Query 16406 TTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAA 16446 || | ||| || || ||| || |||||||| || ||||| Sbjct 192046 TTCTTTTTAATGCATGGCATTGTCTCTATGGCATTGAACAA 192006 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 16587 CCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGA 16646 ||| ||| ||||| || || || ||||||||||||||||| ||||| | || ||||| Sbjct 189527 CCAAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAGAAATGA 189468 Query 16647 AATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTT 16706 ||| | ||| |||| | | | | | ||| | ||||| || |||| ||| || | Sbjct 189467 AATGCTGTTCATCAGTTTTCAATTTTTCCCAGTGGCCCAAATCCTTTGATAAATCAACCT 189408 Query 16707 CTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATT 16766 |||| ||||| || ||| || || || |||||||| |||| || || | |||| Sbjct 189407 CTTCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTTGATATT 189348 Query 16767 GTATGGGAAA 16776 | || ||||| Sbjct 189347 GAATAGGAAA 189338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510444796653680