Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq24522 194 2e-44 seq74122 123 3e-23 >seq24522 Length=437104 Score = 194 bits (214), Expect = 2e-44 Identities = 324/462 (70%), Gaps = 15/462 (3%) Strand=Plus/Plus Query 53724 AAACGGCT-ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACAC 53782 ||||| || ||||||| | ||| |||| | || || || || | |||||| || Sbjct 250008 AAACGACTTACCTCATCTGGTGCCGTGTATTCAACAATTTCTGTACATAAATTACTGCAT 250067 Query 53783 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 53842 || || || || | |||||||| || ||||| |||||| | |||||| || || ||| Sbjct 250068 TTTATTGTCCCAAGGTTTTGTTGGTTGCTCTTGCGGTTACAAGAATCCTTGTACAGCATG 250127 Query 53843 AATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTT 53902 | || ||||||||||| | || | |||||||| || | |||||| |||| || Sbjct 250128 TAAGGTGTACCAGTTTCGGTTTGAGCTTCTATAACTGCATACCAGACTTTCTGAGCTTTC 250187 Query 53903 ATTATAGATTTGTATCTCTTTT-----CTCTTTCGTATAGTG-TATACAATCGTTCAAAC 53956 | || || | | | ||| || |||| || | || ||||||| |||||| Sbjct 250188 A-----GAGTTCTTTTACCTTTACCAGCTTTTTCATA-ACTGATATACAAGTCTTCAAAT 250241 Query 53957 TCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCT 54016 || | ||||||||||| | || || ||||||| ||||||||||| | ||| || Sbjct 250242 TCTTTTCCCCAAACATCCGAAAGGCCTGGGCATTCATTGGGACACATCAATGTCCAATCA 250301 Query 54017 CCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATC 54075 || | || | ||||||||||| || |||||||||||||| || || ||| || | || Sbjct 250302 CCATTTTCTTCAACTCGTTTCATGAAAAGATCAGGAATCCAGAGGGC-ATAGAACAAGTC 250360 Query 54076 TCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 54135 || || || ||||| || ||||||||||||||||| ||| ||||| | | ||||| Sbjct 250361 TCGGGCTCGCTGTTCATCCTTTCCTGTATTCTTTTTGCAATCAAGGAAGTCAAAGATATC 250420 Query 54136 AGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCG 54177 | |||||| ||||| ||||| || | | | ||||||| || Sbjct 250421 GGCATGCCAGGGTTCTAAGTAAATAGCAAAAGCTCCAGGGCG 250462 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 53390 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 53449 || || ||||| || || || ||||| |||||||| ||| |||||| | | | | Sbjct 246909 TAAGTCTCGTAAGGACCAAATTTTTCAGCAAGTTCACAGCTCATCTCTAAGGAAGCAAAG 246968 Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 53509 || || || | ||||||| ||||| | ||||||||||| ||| ||||| || || Sbjct 246969 TAGATAGTAGCAAAGATCTGTTTATTCAATTCTTGTGCTTCTTCGCTGTCAAACGGGTAT 247028 Query 53510 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567 | |||| || || || || || |||||||||||||| || || |||| ||||| Sbjct 247029 CGCATTAGAAGGAAAGCATCGGCCAAACCTTGAACACCAATGCCAATTGGTCGATGTC 247086 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 53156 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 53215 ||||||||||||| || | | || |||||||| |||||||| | ||| | |||||| Sbjct 241873 AATTCTCCAGACAGCACACGTCTTGTATAAATATTGCTGGTATAGGCTTCAATGGACTCA 241932 Query 53216 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 53261 |||||||| | ||| || || || || ||||| ||||| || |||| Sbjct 241933 TTATTTCCAAGAATCTGGGCTGTGGAAGCAGTTGGCATCGGAGCCA 241978 >seq74122 Length=500396 Score = 123 bits (136), Expect = 3e-23 Identities = 159/218 (73%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 24519 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 24578 || |||||||| || ||||| ||||| || |||||||| ||||| ||||| || ||| Sbjct 189525 AAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAGAAATGAAA 189466 Query 24579 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 24638 | | ||| || | | | | ||| | ||| | | ||| || |||| ||| || ||| Sbjct 189465 TGCTGTTCATCAGTTTTCAATTTTTCCCAGTGGCCCAAATCCTTTGATAAATCAACCTCT 189406 Query 24639 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 24698 ||||| ||||| || || || | || || |||||||| |||| ||||| ||||||||| Sbjct 189405 TCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTTGATATTGA 189346 Query 24699 ATTGGAAAAATAACAAATCTATTTG-GATTTTTTGCAA 24735 || ||||| || ||||| | |||| | ||| ||| || Sbjct 189345 ATAGGAAACATTACAAAACGGTTTGAGCTTTCTTGTAA 189308 Score = 123 bits (136), Expect = 3e-23 Identities = 161/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||| ||||| || |||||||| ||| || || | || ||||| | |||||||| | Sbjct 192225 CCTCATCTCTGCTGATTAATTCATTGCTGAATGTCAAACCAGGCATGATACCACGCTTCT 192166 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | | ||| || || | ||||| || ||||| || || ||||||||||| | ||||| | Sbjct 192165 TTAACCAGAAAATAGCAGCAAAAGAACCAGAGAAAAAGATTCCTTCTACCCCAGCAAAAG 192106 Query 24277 CAATAAGTCTTTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 24336 ||| || | ||| ||| | | ||||| ||||| || ||||||||| || | Sbjct 192105 CAACAACACGCTCTGAATATGGGACCTTGTCAGAAATCCATTTCAAAGCCCAATCAGCTT 192046 Query 24337 TCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 24379 ||||||| | || |||||||||||||| ||||| || | ||| Sbjct 192045 TCTTTTTAATGCATGGCATTGTCTCTATGGCATTGAACAAATA 192003 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 23828 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 23887 |||||| || ||||||||||| |||||||| || | || || || |||||||| || || Sbjct 193926 AGACATGACGCCCATTTTTTGATATTCACCAACTCTCTTCTCAAAGAAATTAGTCTTTCC 193867 Query 23888 TTCTAATGATATATTTTCCATGAAATCGGATGGATT 23923 ||| ||||| || | |||||| ||||| ||||||| Sbjct 193866 TTCCAATGAGATGTGTTCCATAAAATCAAATGGATT 193831 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||||| ||||||||||| | ||||| |||||||| |||||||| |||||||| || Sbjct 191302 ATCTTTAATGTATGTATCAATAAGGAGACTGTACATTTCAGAATGAATATTTTCAATAGC 191243 Query 24455 CATTTGAAATCCGTAGAA 24472 ||||| ||| |||| || Sbjct 191242 AATTTGGAATGCGTAAAA 191225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592595948375520