Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq15337 95.1 1e-14 >seq15337 Length=1015838 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | |||||| | || || |||||||| || ||| ||||| || Sbjct 840899 ATGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCA 840958 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||| || || ||||||||| | || ||||||| Sbjct 840959 GATACCATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 841018 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | || || ||||| || ||||| ||||||||| ||| | | ||||||||| Sbjct 841019 CAGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAAT 841078 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||| |||||||| ||||| | || | ||||| |||| || Sbjct 841079 ATCCAGAAAGAATCTACCCTTCATCTTGTACTTCGATTGAGAGGTGG 841125 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | |||||| | || || |||||||| || ||| ||||| | Sbjct 840215 ATGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCC 840274 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || |||||| || ||||||||| | ||| ||||||| Sbjct 840275 GACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAA 840334 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | || || ||||| || ||||| ||||||||| ||| | | ||||||||| Sbjct 840335 CAGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCGGATTACAAT 840394 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 || ||||| ||||||||||| || Sbjct 840395 ATCCAGAAAGAATCTACTCTCCA 840417 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | |||||| | || || |||||||| || ||| || || || Sbjct 840671 ATGCAAATTTTTGTAAAAACACTCACAGGAAAAACCATCACATTGGAAGTAGAGCCTTCA 840730 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || |||||| || ||||||||| | ||| ||||||| Sbjct 840731 GATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAA 840790 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | || || ||||| || ||||| ||||||||| ||| | | ||||||||| Sbjct 840791 CAACGTCTGATTTTTGCAGGAAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAAT 840850 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 || ||||| |||||||| || || Sbjct 840851 ATCCAGAAAGAATCTACCCTCCA 840873 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 ||||||||||| || | |||||| ||||||| || |||||||| || |||||| Sbjct 838842 AAAATGCAAATTTTTGTAAAAACACTGACGGGAAAGACCATTACTTTGGAGGTGGAACCG 838901 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | || | ||| ||| || || ||||||||| | || |||| Sbjct 838902 TCTGATACAATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGAT 838961 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATT 29136 ||||| | | || ||||| || ||||| |||||||| || | || | | |||| Sbjct 838962 CAACAGCGTTTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACCCTCT--CAGATT 839019 Query 29137 ACAATATTCAGAAGGAATCTACTCTTCA 29164 ||||||| ||||| |||||||| || || Sbjct 839020 ACAATATCCAGAAAGAATCTACCCTCCA 839047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427544209392470