Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq15337 102 7e-17 >seq15337 Length=1015838 Score = 102 bits (112), Expect = 7e-17 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| ||||| ||||| || || |||||||| | ||| || ||| || | Sbjct 840878 CAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCCA 840819 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||||||||| || | || ||||| || ||||| || || || || || |||||| || Sbjct 840818 GCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTTGAA 840759 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 |||| ||| || | ||| | ||| || | ||| || || | || | ||||| | Sbjct 840758 TTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACTTCCAATGTGATGGTTTTTC 840699 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || |||||||||||||| ||||| Sbjct 840698 CTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| || || ||||| || || |||||||| | ||| || ||| || | Sbjct 840650 CAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCCA 840591 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||||| || || | || |||||||| ||||| ||||| || || || |||||| || Sbjct 840590 ACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGAA 840531 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 |||| ||| || | ||| | ||||| | || || || | || | ||||| | Sbjct 840530 TTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTTTC 840471 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || |||||||||||||| ||||| Sbjct 840470 CTGTAAGTGTTTTTACAAAAATTTGCAT 840443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433028452846408