Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq15337 116 5e-21 seq2214 86.0 9e-12 >seq15337 Length=1015838 Score = 116 bits (128), Expect = 5e-21 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| |||| | ||| | ||| | ||||||||||| ||||| |||||||| Sbjct 840897 CCACCTCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 840838 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| || | |||||||| |||||||||| | ||| ||||| || ||| Sbjct 840837 AGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGA 840778 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||| ||||| ||||||||| |||||| Sbjct 840777 ATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACT 840718 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | |||||| ||||| ||||| | |||||| | || |||||||| Sbjct 840717 TCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 111 bits (122), Expect = 2e-19 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | || | ||| | ||| | ||||||||||| ||||| |||||||| Sbjct 841125 CCACCTCTCAATCGAAGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 841066 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| || | ||||| || |||||||||| | || ||||| |||||| Sbjct 841065 AGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGA 841006 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||| ||||| ||||||||| ||||||| Sbjct 841005 ATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACT 840946 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | |||||| ||||| ||||| | |||||| | || |||||||| Sbjct 840945 TCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840899 Score = 107 bits (118), Expect = 3e-18 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| |||| | ||| | ||| | |||||||||||| ||||| ||||| || Sbjct 840441 CCACCTCTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAG 840382 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| || | ||||| || |||||||||| | || ||||| || ||| Sbjct 840381 AGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGA 840322 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||| ||||| ||| || ||| ||||||| Sbjct 840321 ATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACT 840262 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | |||||| ||||| ||||| | |||||| | || |||||||| Sbjct 840261 TCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | | | ||| | ||| | ||||||||||| ||||| |||||||| Sbjct 839071 CCACCTCTCAACCGGAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 839012 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || || ||||| || ||||||||||| | || ||||| |||||| Sbjct 839011 AGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGGA 838952 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| ||||| Sbjct 838951 ATACCTTCTTTGTCTTG 838935 >seq2214 Length=644335 Score = 86.0 bits (94), Expect = 9e-12 Identities = 86/109 (79%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 146069 ACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATC 146127 |||||||| | || || || ||| || || || || ||||| || || | || ||| || Sbjct 547398 ACCAAATGAAGGGTTGACTCCTTTTGA-ATGTTGTAGTCTGACAGCGTACGGCCATCCTC 547340 Query 146128 TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCT 146176 | ||| || |||||||| ||||||||||||||||| |||||||||||| Sbjct 547339 AAGTTGCTTACCAGCAAAGATCAATCTTTGCTGATCTGGAGGAATTCCT 547291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742116729710080