Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq74122 136 4e-27 >seq74122 Length=500396 Score = 136 bits (150), Expect = 4e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 16622 AAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAA 16681 |||||||| ||||| |||||||| || || |||||||| || | | || ||| ||| Sbjct 189525 AAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAGAAATGAAA 189466 Query 16682 tttttttCGTTATCTGAAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCT 16741 | | ||| | | | | |||| ||||| ||||| ||||||||||| |||||| Sbjct 189465 TGCTGTTCATCAGTTTTCAATTTTTCCCAGTGGCCCAAATCCTTTGATAAATCAACCTCT 189406 Query 16742 TCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACA 16801 || |||||||| |||||||||||||| || |||||||| |||||||||||| || | Sbjct 189405 TCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTTGATATTGA 189346 Query 16802 ATAGGAAACA 16811 |||||||||| Sbjct 189345 ATAGGAAACA 189336 Score = 113 bits (124), Expect = 4e-20 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988 ||||| || ||||||||||||||||| ||||||||| ||||||||||| || |||||| Sbjct 193925 GACATGACGCCCATTTTTTGATATTCACCAACTCTCTTCTCAAAGAAATTAGTCTTTCCT 193866 Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATT 16023 || ||||| || | ||||||||||||||| ||||| Sbjct 193865 TCCAATGAGATGTGTTCCATAAAATCAAATGGATT 193831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461635111936400