Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq74122 129 6e-25 >seq74122 Length=500396 Score = 129 bits (142), Expect = 6e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 14589 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14648 |||| ||||||||||| || |||||||| || |||||||| ||||| | | ||| | Sbjct 189527 CCAAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAGAAATGA 189468 Query 14649 AGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTT 14708 | | || || ||| | | | ||||| ||| | | | |||||||| || | ||| || | Sbjct 189467 AATGCTGTTCATCAGTTTTCAATTTTTCCCAGTGGCCCAAATCCTTTGATAAATCAACCT 189408 Query 14709 CATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14768 | || || ||||| ||| |||||||||||| |||||||| |||||| |||| |||| Sbjct 189407 CTTCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTTGATATT 189348 Query 14769 ATATAGGAAAAACTACAAA 14787 |||||||| | |||||| Sbjct 189347 GAATAGGAAACATTACAAA 189329 Score = 120 bits (132), Expect = 3e-22 Identities = 84/96 (88%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 13897 AGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACC 13956 ||| || |||||||||||||||||||||| |||||| || |||||||| ||||| || || Sbjct 193926 AGACATGACGCCCATTTTTTGATATTCACCAACTCTCTTCTCAAAGAAATTAGTCTTTCC 193867 Query 13957 TTCCAGTGATATATTTTCCATAAAATCAAATGGATT 13992 ||||| ||| || | ||||||||||||||||||||| Sbjct 193866 TTCCAATGAGATGTGTTCCATAAAATCAAATGGATT 193831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481431108918320