Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq15337 98.7 8e-16 >seq15337 Length=1015838 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | ||||| ||||| | || || ||||||||||| || || ||||| || | Sbjct 840669 CCACCTCTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAG 840610 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || ||||||||| ||||| || ||| | || || | |||||||| || Sbjct 840609 AGAGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGA 840550 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTG-ACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| || || ||||| | |||| || | | ||| |||||| || || Sbjct 840549 ATACCTTCTTTGTCTTGAATTT-TGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTAC 840491 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | |||||| |||| || || | ||||||||||||||||||||| Sbjct 840490 TTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCAT 840443 Score = 95.1 bits (104), Expect = 9e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 |||| |||||| | || || || |||||||| || || ||||| || | | || | Sbjct 840888 AGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGA 840829 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | |||||||| ||||| || ||| | || || | ||||||||| ||| | ||||| Sbjct 840828 CCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGAATACCTTCT 840769 Query 18228 TTATCGGCAATTTGTTGCTTG-ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGT 18286 || || ||||| | |||| || | | ||| || || ||||| ||| | || Sbjct 840768 TTGTCTTGAATTT-TGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACTTCCAATGT 840710 Query 18287 GATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| |||| || || | ||||||||||||||||||||| Sbjct 840709 GATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 |||| ||||| | || || || |||||||| || || ||||| || | | || | Sbjct 840432 AGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAGAGAGTACGA 840373 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | |||||||| ||||| || ||| | || || | |||||||| ||| | ||||| Sbjct 840372 CCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGAATACCTTCT 840313 Query 18228 TTATCGGCAATTTGTTGCTTG-ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGT 18286 || || ||||| | |||| || | | ||| |||||| || || ||| | || Sbjct 840312 TTGTCTTGAATTT-TGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGT 840254 Query 18287 GATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| |||| || || | |||||| |||||||||||||| Sbjct 840253 GATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378642772421130