Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq24522 197 2e-45 seq74122 127 3e-24 >seq24522 Length=437104 Score = 197 bits (218), Expect = 2e-45 Identities = 325/462 (70%), Gaps = 15/462 (3%) Strand=Plus/Plus Query 65755 AAACGGCT-ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACAC 65813 ||||| || ||||||| | ||| |||| | || || || || | |||||| || Sbjct 250008 AAACGACTTACCTCATCTGGTGCCGTGTATTCAACAATTTCTGTACATAAATTACTGCAT 250067 Query 65814 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 65873 || || || || | |||||||| || ||||| |||||| | |||||| || || ||| Sbjct 250068 TTTATTGTCCCAAGGTTTTGTTGGTTGCTCTTGCGGTTACAAGAATCCTTGTACAGCATG 250127 Query 65874 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 65933 | || ||||||||||| | |||| |||||||| || | |||||| |||| || Sbjct 250128 TAAGGTGTACCAGTTTCGGTTTGAGCTTCTATAACTGCATACCAGACTTTCTGAGCTTTC 250187 Query 65934 ATTATAGATTTGTATCTCTTTT-----CTCTTTCGTATAGTG-TATACAATCGTTCGAAC 65987 | || || | | | ||| || |||| || | || ||||||| ||| || Sbjct 250188 A-----GAGTTCTTTTACCTTTACCAGCTTTTTCATA-ACTGATATACAAGTCTTCAAAT 250241 Query 65988 TCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCT 66047 || | ||||||||||| | || || ||||||| ||||||||||| | ||| || Sbjct 250242 TCTTTTCCCCAAACATCCGAAAGGCCTGGGCATTCATTGGGACACATCAATGTCCAATCA 250301 Query 66048 CCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATC 66106 || | || | ||||||||||| || |||||||||||||| || || ||| || || || Sbjct 250302 CCATTTTCTTCAACTCGTTTCATGAAAAGATCAGGAATCCAGAGGGC-ATAGAACAAGTC 250360 Query 66107 TCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 66166 || || || ||||| || ||||||||||||||||| ||| ||||| | | ||||| Sbjct 250361 TCGGGCTCGCTGTTCATCCTTTCCTGTATTCTTTTTGCAATCAAGGAAGTCAAAGATATC 250420 Query 66167 ATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 66208 |||||| ||||| ||||| || || | | ||||||| || Sbjct 250421 GGCATGCCAGGGTTCTAAGTAAATAGCAAAAGCTCCAGGGCG 250462 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 65421 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 65480 || || ||||| || || || ||||| |||||||| ||| |||||| | | | | Sbjct 246909 TAAGTCTCGTAAGGACCAAATTTTTCAGCAAGTTCACAGCTCATCTCTAAGGAAGCAAAG 246968 Query 65481 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 65540 || || || | ||||||| ||||| | ||||||||||| ||| ||||| || || Sbjct 246969 TAGATAGTAGCAAAGATCTGTTTATTCAATTCTTGTGCTTCTTCGCTGTCAAACGGGTAT 247028 Query 65541 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598 | |||| || || || || || |||||||||||||| || || |||| ||||| Sbjct 247029 CGCATTAGAAGGAAAGCATCGGCCAAACCTTGAACACCAATGCCAATTGGTCGATGTC 247086 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246 ||||||||||||| || | | || |||||||| |||||||| | ||| | |||||| Sbjct 241873 AATTCTCCAGACAGCACACGTCTTGTATAAATATTGCTGGTATAGGCTTCAATGGACTCA 241932 Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 65292 |||||||| | ||| || || || || ||||| ||||| || |||| Sbjct 241933 TTATTTCCAAGAATCTGGGCTGTGGAAGCAGTTGGCATCGGAGCCA 241978 >seq74122 Length=500396 Score = 127 bits (140), Expect = 3e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| || |||||||| ||| || || | || ||||| | |||||||| | Sbjct 192225 CCTCATCTCTGCTGATTAATTCATTGCTGAATGTCAAACCAGGCATGATACCACGCTTCT 192166 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | | ||| || || | ||||| || ||||| || || ||||||||||| | ||||| | Sbjct 192165 TTAACCAGAAAATAGCAGCAAAAGAACCAGAGAAAAAGATTCCTTCTACCCCAGCAAAAG 192106 Query 36300 CAATAAGTCTCTCTCCATAACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 36359 ||| || | |||| ||| | | ||||| ||||| || ||||||||| || | Sbjct 192105 CAACAACACGCTCTGAATATGGGACCTTGTCAGAAATCCATTTCAAAGCCCAATCAGCTT 192046 Query 36360 TCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 36402 ||||||| | || |||||||||||||| ||||| || | ||| Sbjct 192045 TCTTTTTAATGCATGGCATTGTCTCTATGGCATTGAACAAATA 192003 Score = 116 bits (128), Expect = 5e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 36542 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601 || |||||||| || ||||| ||||| || |||||||| ||||| ||||| || ||| Sbjct 189525 AAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAGAAATGAAA 189466 Query 36602 TATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 36661 | | ||| | | | | | ||| | ||| | | ||| || |||| ||| || ||| Sbjct 189465 TGCTGTTCATCAGTTTTCAATTTTTCCCAGTGGCCCAAATCCTTTGATAAATCAACCTCT 189406 Query 36662 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 36721 ||||| ||||| || || || | || || |||||||| |||| ||||| ||||||||| Sbjct 189405 TCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTTGATATTGA 189346 Query 36722 ATTGGAAAAATAACAAA 36738 || ||||| || ||||| Sbjct 189345 ATAGGAAACATTACAAA 189329 Score = 93.3 bits (102), Expect = 6e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 35851 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 35910 |||||| || ||||||||||| |||||||| || | || || || |||||||| || || Sbjct 193926 AGACATGACGCCCATTTTTTGATATTCACCAACTCTCTTCTCAAAGAAATTAGTCTTTCC 193867 Query 35911 TTCTAATGATATATTTTCCATGAAATCGAATGGATT 35946 ||| ||||| || | |||||| ||||| |||||||| Sbjct 193866 TTCCAATGAGATGTGTTCCATAAAATCAAATGGATT 193831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656924953734160