Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq24522 185 1e-41 seq74122 127 3e-24 >seq24522 Length=437104 Score = 185 bits (204), Expect = 1e-41 Identities = 320/461 (69%), Gaps = 13/461 (3%) Strand=Plus/Plus Query 79634 AAACGGCT-ACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACAC 79692 ||||| || ||||||| | ||| |||| | ||||| || || | ||||| || Sbjct 250008 AAACGACTTACCTCATCTGGTGCCGTGTATTCAACAATTTCTGTACATAAATTACTGCAT 250067 Query 79693 TTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 79752 || || || || | |||||||| || ||||| |||||| | |||||| || || ||| Sbjct 250068 TTTATTGTCCCAAGGTTTTGTTGGTTGCTCTTGCGGTTACAAGAATCCTTGTACAGCATG 250127 Query 79753 AACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 79812 | || ||||||||||| | |||| |||||||| || | |||||| |||| || Sbjct 250128 TAAGGTGTACCAGTTTCGGTTTGAGCTTCTATAACTGCATACCAGACTTTCTGAGCTTTC 250187 Query 79813 ATTATAGACTTGTATCTCTTTT-----CTCTTTCGTATTGTGTATATAATCGTTCGAACT 79867 | || || | | | ||| || |||| || |||| || ||| || | Sbjct 250188 A-----GAGTTCTTTTACCTTTACCAGCTTTTTCATAACTGATATACAAGTCTTCAAATT 250242 Query 79868 CGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTC 79927 | | |||||||||||| | || || ||||| | ||||||||||| | ||| || | Sbjct 250243 CTTTTCCCCAAACATCCGAAAGGCCTGGGCATTCATTGGGACACATCAATGTCCAATCAC 250302 Query 79928 CATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCT 79986 ||| || | ||||||||||| || |||||||||||||| || || ||| || | ||| Sbjct 250303 CATTTTCTTCAACTCGTTTCATGAAAAGATCAGGAATCCAGAGGGC-ATAGAACAAGTCT 250361 Query 79987 CTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 80046 | || || || || || ||||||||||||||||| ||| ||||| | | ||||| Sbjct 250362 CGGGCTCGCTGTTCATCCTTTCCTGTATTCTTTTTGCAATCAAGGAAGTCAAAGATATCG 250421 Query 80047 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCG 80087 | |||||| ||||| ||||| || || | | |||| || || Sbjct 250422 GCATGCCAGGGTTCTAAGTAAATAGCAAAAGCTCCAGGGCG 250462 >seq74122 Length=500396 Score = 127 bits (140), Expect = 3e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| || |||| ||| ||| || || | || ||||| | |||||||| | Sbjct 192225 CCTCATCTCTGCTGATTAATTCATTGCTGAATGTCAAACCAGGCATGATACCACGCTTCT 192166 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | | ||| || || | ||||| || ||||| || |||||||||||||| | ||||| | Sbjct 192165 TTAACCAGAAAATAGCAGCAAAAGAACCAGAGAAAAAGATTCCTTCTACCCCAGCAAAAG 192106 Query 50102 CAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 50161 |||||| | |||| ||| | | ||||| ||||| || ||||||||| || | Sbjct 192105 CAACAACACGCTCTGAATATGGGACCTTGTCAGAAATCCATTTCAAAGCCCAATCAGCTT 192046 Query 50162 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204 ||||||| | || ||||| || ||||||||||| || | ||| Sbjct 192045 TCTTTTTAATGCATGGCATTGTCTCTATGGCATTGAACAAATA 192003 Score = 102 bits (112), Expect = 1e-16 Identities = 80/96 (83%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 49653 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 49712 |||||| || ||||||||||| |||||||| || | || || || |||||||| ||||| Sbjct 193926 AGACATGACGCCCATTTTTTGATATTCACCAACTCTCTTCTCAAAGAAATTAGTCTTTCC 193867 Query 49713 TTCCAATGATATATTTTCCATGAAATCAAACGGATT 49748 ||||||||| || | |||||| |||||||| ||||| Sbjct 193866 TTCCAATGAGATGTGTTCCATAAAATCAAATGGATT 193831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716907016225360