Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq74122 125 7e-24 >seq74122 Length=500396 Score = 125 bits (138), Expect = 7e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 14257 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14316 |||| ||||||||||| || |||||||| || |||||||| ||||| | | ||| | Sbjct 189527 CCAAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAGAAATGA 189468 Query 14317 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTT 14376 | | || || ||| | || | ||||| ||| | | |||||||| || | ||| || | Sbjct 189467 AATGCTGTTCATCAGTTTTCAATTTTTCCCAGTGGCCCAAATCCTTTGATAAATCAACCT 189408 Query 14377 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14436 | || || ||||| ||| ||| |||||||| |||||||| |||||| |||| |||| Sbjct 189407 CTTCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTTGATATT 189348 Query 14437 ATATAGGAAAAACTACAAA 14455 |||||||| | |||||| Sbjct 189347 GAATAGGAAACATTACAAA 189329 Score = 120 bits (132), Expect = 3e-22 Identities = 84/96 (88%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 13565 AGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACC 13624 ||| || |||||||||||||||||||||| |||||| || |||||||| ||||| || || Sbjct 193926 AGACATGACGCCCATTTTTTGATATTCACCAACTCTCTTCTCAAAGAAATTAGTCTTTCC 193867 Query 13625 TTCCAGTGATATATTTTCCATAAAATCAAATGGATT 13660 ||||| ||| || | ||||||||||||||||||||| Sbjct 193866 TTCCAATGAGATGTGTTCCATAAAATCAAATGGATT 193831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478818471691600