Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq74122 138 1e-27 >seq74122 Length=500396 Score = 138 bits (152), Expect = 1e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 14045 CCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14104 ||||||||||||||||||| |||||||| || |||||||| ||||| | | ||| | Sbjct 189527 CCAAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAGAAATGA 189468 Query 14105 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTT 14164 | | || || ||| | || | ||||| ||| | | | |||||||| || | ||| || | Sbjct 189467 AATGCTGTTCATCAGTTTTCAATTTTTCCCAGTGGCCCAAATCCTTTGATAAATCAACCT 189408 Query 14165 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14224 | || || ||||| ||| ||| |||||||| |||||||| |||||| |||| |||| Sbjct 189407 CTTCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTTGATATT 189348 Query 14225 ATATAGGAAAAACTACAAA 14243 |||||||| | |||||| Sbjct 189347 GAATAGGAAACATTACAAA 189329 Score = 111 bits (122), Expect = 2e-19 Identities = 82/96 (85%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 13353 AGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACC 13412 ||| || |||||||||||||||||||||| |||||| || ||||| || ||||| || || Sbjct 193926 AGACATGACGCCCATTTTTTGATATTCACCAACTCTCTTCTCAAAGAAATTAGTCTTTCC 193867 Query 13413 TTCCAGTGATATATTTTCCATAAAATCGAATGGATT 13448 ||||| ||| || | |||||||||||| |||||||| Sbjct 193866 TTCCAATGAGATGTGTTCCATAAAATCAAATGGATT 193831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477681431529360