Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq15337 104 2e-17 >seq15337 Length=1015838 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | ||||| | || | ||||| ||| || || || | ||||||||| || Sbjct 840441 CCACCTCTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAG 840382 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || |||| ||||| || |||||||||| ||||||||||| | || Sbjct 840381 AGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGA 840322 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || || |||| || | ||| |||||| || || || Sbjct 840321 ATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACT 840262 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || |||||||| || || |||||||||||||||||||| Sbjct 840261 TCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Score = 102 bits (112), Expect = 6e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || || || | ||||||||| || | ||||| | || ||||| ||||| || |||||| Sbjct 839035 TCTTTCTGGATATTGTAATCTGAGAGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAA 838976 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 ||||| ||||||||||| | || | ||||||||| || |||| | || || | Sbjct 838975 ATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTT 838916 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| ||| || | || || || | || || || ||||| || || ||||| ||| Sbjct 838915 TCAATTGTATCAGACGGTTCCACCTCCAAAGTAATGGTCTTTCCCGTCAGTGTTTTTACA 838856 Query 43099 AAAATTTGCATTTT 43112 |||||||||||||| Sbjct 838855 AAAATTTGCATTTT 838842 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 42906 ATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTG 42965 ||||| ||| || || || | ||||||||| || | ||||| | || ||||| || Sbjct 840646 ATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCCAACTG 840587 Query 42966 TTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAA 43025 ||| || |||||||||| ||||||||||| | || | ||||||||| || || Sbjct 840586 TTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTT 840527 Query 43026 CTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGT 43085 |||| || | ||| |||||| || || || || | || || |||||||| || Sbjct 840526 GGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGT 840467 Query 43086 TAGAGTTTTCACAAAAATTTGCAT 43109 || ||||| |||||||||||||| Sbjct 840466 AAGTGTTTTTACAAAAATTTGCAT 840443 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || || || | ||||||||| || | ||||| | || |||| ||||| || |||||| Sbjct 841089 TCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAA 841030 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 |||| ||||||||||| | || | ||||||||| || |||| | || || | Sbjct 841029 ATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTT 840970 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| || || || || || || | || || |||||||| || || ||||||||| Sbjct 840969 TCAATGGTATCTGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACA 840910 Query 43099 AAAATTTGCAT 43109 ||||||||||| Sbjct 840909 AAAATTTGCAT 840899 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || || || | ||||||||| || | ||||| | || |||| ||||| || |||||| Sbjct 840861 TCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAA 840802 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 |||| || |||||||| | || | ||||||||| || || |||| || | Sbjct 840801 ATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTT 840742 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| || || || ||| || || | || || |||||||| || || ||||| ||| Sbjct 840741 TCAATGGTATCTGAAGGCTCTACTTCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACA 840682 Query 43099 AAAATTTGCAT 43109 ||||||||||| Sbjct 840681 AAAATTTGCAT 840671 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 42946 GTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACA 43005 ||||| | || |||| ||||| || |||||||||| ||||||||||| | || | | Sbjct 839236 GTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATA 839177 Query 43006 CCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCT 43065 |||||||| || |||| | || || | ||| || || || || || || Sbjct 839176 CCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCC 839117 Query 43066 ACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || || |||||||| || || |||||||||||||||||||| Sbjct 839116 AATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 839073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380664628045092