Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq15337 145 6e-30 >seq15337 Length=1015838 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||| || | || | ||| ||||| || ||||| || || |||||||| Sbjct 840897 CCACCTCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 840838 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| | ||||| || || | |||| ||||||||| || ||| Sbjct 840837 AGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGA 840778 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||||||| |||||| |||| |||||||| | ||||| Sbjct 840777 ATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACT 840718 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || |||||||| ||||| || ||||||||||||||||||||| Sbjct 840717 TCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCATA 840670 Score = 145 bits (160), Expect = 6e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||||| | || | ||||||||| || ||||| || || |||||||| Sbjct 841125 CCACCTCTCAATCGAAGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 841066 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| | ||||| || || | |||| ||| ||||| || ||| Sbjct 841065 AGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGA 841006 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||||||||| || ||||| ||||||| |||| |||||||| | |||||| Sbjct 841005 ATACCTTCTTTGTCTTGGATCTTTGC-CTTTACATTTTCAATGGTATCTGAAGGTTCTAC 840947 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || |||||||| ||||| || ||||| ||||||||||||||| Sbjct 840946 TTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCATA 840898 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| | || | || | ||| || || || ||||| || || |||||||| Sbjct 840669 CCACCTCTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAG 840610 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| || ||||| || || | |||| ||| ||||| || ||| Sbjct 840609 AGAGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGA 840550 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||||||| |||||| |||| || || ||| | |||||| Sbjct 840549 ATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACT 840490 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || |||||||| ||||| || ||||||||||||||||||||| Sbjct 840489 TCCAATGTGATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCATA 840442 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||| || | || | ||| || || || ||||| || || |||||||| Sbjct 840441 CCACCTCTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAG 840382 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| | ||||| || || | |||| ||| ||||| || ||| Sbjct 840381 AGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGA 840322 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||||||| |||||| |||| || || ||| | |||||| Sbjct 840321 ATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACT 840262 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || |||||||| ||||| || ||||| ||||||||||||||| Sbjct 840261 TCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCATA 840214 Score = 131 bits (144), Expect = 1e-25 Identities = 179/245 (73%), Gaps = 5/245 (2%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||| | | || | ||| ||||| || ||||| || || |||||||| Sbjct 839071 CCACCTCTCAACCGGAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 839012 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||| || ||||| || || | |||||||| ||||| || ||| Sbjct 839011 AGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGGA 838952 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||||||||| || ||||| ||||||| |||| || ||||| ||| || Sbjct 838951 ATACCTTCTTTGTCTTGGATCTTTGC-CTTTACATTTTCAATTGTATCAGACGGTTCCAC 838893 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT--TG-AAAA 15372 || || |||||||| || || ||||| |||||||||||||||||||| || || |||| Sbjct 838892 CTCCAAAGTAATGGTCTTTCCCGTCAGTGTTTTTACAAAAATTTGCATTTTGCTGTAAAA 838833 Query 15373 TAAAA 15377 |||| Sbjct 838832 GAAAA 838828 Score = 109 bits (120), Expect = 4e-19 Identities = 120/157 (76%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 ||||| | ||||| || || | |||| ||| ||||| || ||||| ||||||||| Sbjct 839227 TCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTG 839168 Query 15269 TCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327 || || ||||| ||||||| |||| |||||||| | |||||| || || || || Sbjct 839167 TCTTGGATCTTTGC-CTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGAT 839109 Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||| ||||| || ||||| ||||||||||||||| Sbjct 839108 GGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCATA 839072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361509702015234