Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq15337 96.9 2e-15 >seq15337 Length=1015838 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||| || | || | ||| || || ||||| || ||||| ||||| Sbjct 840898 ACCACCTCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGA 840839 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | ||| |||| |||| |||||||||||||| |||| ||||| || || | || Sbjct 840838 GAGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGG 840779 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||| ||| |||||| ||| || | ||| ||||||| ||||| || Sbjct 840778 AATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTAC 840719 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||| || || | || || ||||| |||||||| Sbjct 840718 TTCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354121784071752