Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq15337 111 1e-19 >seq15337 Length=1015838 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||| || ||||||||||| || || |||||||| | ||| | |||||||| || Sbjct 840418 ATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAGAGAGTACGACCATCTTCCAGCTG 840359 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 ||| || ||| |||| || | ||||||||| ||| | ||||||||||| |||||| Sbjct 840358 TTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGAATACCTTCTTTGTCTTGAATTTT 840299 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 ||| || | ||| || ||| |||||| ||||| || |||||||| || || Sbjct 840298 GGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGT 840239 Query 20185 CAACGTTTTGACAAAAATTTGCAT 20208 | ||||| |||||||||||||| Sbjct 840238 AAGTGTTTTCACAAAAATTTGCAT 840215 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||| || || |||||||| || || |||||||| | ||| | ||||||||| || Sbjct 840646 ATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCCAACTG 840587 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 ||| || ||| |||| || | ||||||||| || | ||||||||||| |||||| Sbjct 840586 TTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTT 840527 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 ||| || | ||| || ||| |||||| ||||| || |||||||| || || Sbjct 840526 GGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGT 840467 Query 20185 CAACGTTTTGACAAAAATTTGCAT 20208 | ||||| |||||||||||||| Sbjct 840466 AAGTGTTTTTACAAAAATTTGCAT 840443 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||| || ||||||||||| || || |||||||| | ||| | |||||||| || Sbjct 840874 ATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCCAGCTG 840815 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 ||| || ||| |||| || | |||||||| ||| | ||||||||||| |||||| Sbjct 840814 TTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTTGAATTTT 840755 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 ||| || | ||| | ||| ||| || ||||| || |||||||| || || Sbjct 840754 GGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACTTCCAATGTGATGGTTTTTCCTGT 840695 Query 20185 CAACGTTTTGACAAAAATTTGCAT 20208 | ||||| |||||||||||||| Sbjct 840694 GAGTGTTTTTACAAAAATTTGCAT 840671 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| |||| | || | ||| || ||||||||||| || || |||||||| Sbjct 839071 CCACCTCTCAACCGGAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 839012 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | ||||||||| ||||| || ||| |||| | | ||||||||| || Sbjct 839011 AGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGGA 838952 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| || ||| || || | ||| | ||| |||||| Sbjct 838951 ATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTATCAGACGGTTCCACC 838892 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 |||| |||||||| || || |||| ||||| ||||||||||||||||| Sbjct 838891 TCCAAAGTAATGGTCTTTCCCGTCAGTGTTTTTACAAAAATTTGCATTTT 838842 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||| || ||||||||||| || || |||||||| | ||| | |||||||| || Sbjct 841102 ATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCCAGCTG 841043 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 ||| || ||| |||| || | ||||||||| || | ||||||||||| || || Sbjct 841042 TTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTT 840983 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 | || || | ||| | ||| |||||| ||||| || |||||||| || || Sbjct 840982 TGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGT 840923 Query 20185 CAACGTTTTGACAAAAATTTGCAT 20208 | ||||| |||||||||||||| Sbjct 840922 AAGTGTTTTCACAAAAATTTGCAT 840899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418811581784394