Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq74122 118 9e-22 >seq74122 Length=500396 Score = 118 bits (130), Expect = 9e-22 Identities = 143/194 (74%), Gaps = 8/194 (4%) Strand=Plus/Minus Query 13538 AAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAt 13597 |||||||| ||||| || || ||||| |||||||||||||| | | || ||| || Sbjct 189525 AAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAGAAATGAAA 189466 Query 13598 tttttttC----GTTTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTAC 13653 | | ||| |||||| || ||| ||| | ||||| ||||||||||| || Sbjct 189465 TGCTGTTCATCAGTTTTC----AATTTTTCCCAGTGGCCCAAATCCTTTGATAAATCAAC 189410 Query 13654 CTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATA 13713 ||| || || ||||| |||||||||||||| ||||||||||| ||||||| || | ||| Sbjct 189409 CTCTTCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTTGATA 189350 Query 13714 AACAATGGGAAACA 13727 ||| ||||||| Sbjct 189349 TTGAATAGGAAACA 189336 Score = 86.0 bits (94), Expect = 5e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 12845 GACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCT 12904 ||||| || ||||||||||||||| | |||||| || ||||| || || || |||||| Sbjct 193925 GACATGACGCCCATTTTTTGATATTCACCAACTCTCTTCTCAAAGAAATTAGTCTTTCCT 193866 Query 12905 TCTAACGAAATATTTTCCATAAAATCGAAAGGATT 12939 || || || || | |||||||||||| || ||||| Sbjct 193865 TCCAATGAGATGTGTTCCATAAAATCAAATGGATT 193831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430185717450948