Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq144806 82.4 9e-11 >seq144806 Length=4835 Score = 82.4 bits (90), Expect = 9e-11 Identities = 124/174 (71%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 7058 CAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTG 7117 || ||||||||||||||| ||| | || || | |||||||||||| | | ||||| | Sbjct 2841 CACATGGATTCCAAGCAGACATGATTATTCGACGATCATTTGGATT-GCTCTTAATCTGA 2899 Query 7118 TT-ATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATA 7176 || |||| | || ||||| || | || | | |||||| | || |||| Sbjct 2900 TTTATAACTTGTTTCAATTGGTCGACTCCTTTTGATACATAATCACAGTGCATATTTTGG 2959 Query 7177 TAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 || | || |||||||| | ||| || || ||||||| |||||||||||||||| Sbjct 2960 TATTCGGCACCAAAATGACGCCACTGGAATCCATAAACAGGACCTAAATCACCT 3013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594742271378400