Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq680 93.3 2e-14 seq48445 87.8 9e-13 seq11527 87.8 9e-13 seq30809 86.0 3e-12 seq7529 84.2 1e-11 seq5723 84.2 1e-11 seq28008 82.4 4e-11 seq6667 82.4 4e-11 >seq680 Length=309222 Score = 93.3 bits (102), Expect = 2e-14 Identities = 73/87 (84%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| |||| ||||| || || ||||||| |||| |||||||||||||||||| Sbjct 183439 AAAAAATTAAATATGGCCAATATGGGGCTCGAACCCACGACATTCGCGTTATTAGCACGA 183498 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||| |||| Sbjct 183499 CGCTCTAACCAACTGAGCTAACCGGCC 183525 >seq48445 Length=131479 Score = 87.8 bits (96), Expect = 9e-13 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 39256 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 39315 Query 11528 CCGTCGACGA 11537 || | ||||| Sbjct 39316 CCATTGACGA 39325 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 27122 GGTTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 27181 Query 11528 CCGTC 11532 || || Sbjct 27182 CCATC 27186 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 30927 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 30986 Query 11528 CCGTC 11532 || || Sbjct 30987 CCATC 30991 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 15764 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 15823 Query 11528 CC 11529 || Sbjct 15824 CC 15825 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 18491 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 18550 Query 11528 CC 11529 || Sbjct 18551 CC 18552 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 33512 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 33571 Query 11528 CC 11529 || Sbjct 33572 CC 33573 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 77760 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 77701 Query 11528 CC 11529 || Sbjct 77700 CC 77699 >seq11527 Length=536171 Score = 87.8 bits (96), Expect = 9e-13 Identities = 77/96 (80%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||| |||||||| || |||||| | || ||||||| |||| |||||||||| Sbjct 108860 AATTTATAAAAAAATAAGGTTTGGCCAGTATGGGGCTCGAACCCACGACATTCGCGTTAT 108801 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||||| |||||||||||||| ||||| Sbjct 108800 TAGCACGACGCTCTAACCAACTGAGCTAACCGGCCG 108765 >seq30809 Length=363189 Score = 86.0 bits (94), Expect = 3e-12 Identities = 64/73 (88%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 ||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 13347 GGATCGAACACACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 13406 Query 11528 CCG-TCGACGATT 11539 ||| |||| |||| Sbjct 13407 CCGCTCGA-GATT 13418 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 14167 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 14108 Query 11528 CC 11529 || Sbjct 14107 CC 14106 >seq7529 Length=259705 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 104357 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 104298 Query 11528 CCGTC 11532 || || Sbjct 104297 CCATC 104293 >seq5723 Length=616667 Score = 84.2 bits (92), Expect = 1e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 11435 AGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||| || |||| || ||||||| | || ||||||| |||| |||||||||| Sbjct 570361 AGAAAAAAAAAAATTTCGTATTGGCCAGTATGGGGCTCGAACCCACGACATTCGCGTTAT 570302 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||||||||||||| |||| Sbjct 570301 TAGCACGACGCTCTAACCAACTGAGCTAACCGGCC 570267 >seq28008 Length=566459 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 92326 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 92267 Query 11528 CC 11529 || Sbjct 92266 CC 92265 >seq6667 Length=143308 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 120531 GGCTCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 120472 Query 11528 CC 11529 || Sbjct 120471 CC 120470 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261007826489224