Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq15337 127 2e-24 >seq15337 Length=1015838 Score = 127 bits (140), Expect = 2e-24 Identities = 178/248 (72%), Gaps = 4/248 (2%) Strand=Plus/Minus Query 94762 TTTTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTT 94821 |||| |||| ||| || || ||||||| ||| | || | || | ||||||||| || Sbjct 840460 TTTTACAAAAATTTGCATACCACCTCTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTT 840401 Query 94822 TTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATT 94879 || | || ||||| | || || || ||| ||||||||||| || |||| || Sbjct 840400 CTGGATATTGTAATCCG--AGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATC 840343 Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 | | || |||||||| ||||||||||||||||| | |||||| || || || | Sbjct 840342 AGACGCTGTTGATCTGGGGGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCA 840283 Query 94940 ACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999 | |||||| | | || || || | |||||||||||||| ||||| ||||||||||| Sbjct 840282 ATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAA 840223 Query 95000 ATCTGCAT 95007 || ||||| Sbjct 840222 ATTTGCAT 840215 Score = 123 bits (136), Expect = 2e-23 Identities = 173/241 (72%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || ||||||||||| | || | || | |||||||| || || | Sbjct 841137 AAAATTTGCATACCACCTCTCAATCGAAGTACAAGATGAAGGGTAGATTCTTTCTGGATA 841078 Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 || ||||| | | || || || ||| ||||||||||| || |||| || | | | Sbjct 841077 TTGTAATC--TGAGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCT 841020 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 | |||||||||||||||||||||||||| | || |||||||| || | | || | Sbjct 841019 GTTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTAT 840960 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | | || || || | |||||||||||||| ||||| ||||||||||| || |||| Sbjct 840959 CTGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCA 840900 Query 95007 T 95007 | Sbjct 840899 T 840899 Score = 118 bits (130), Expect = 9e-22 Identities = 176/248 (71%), Gaps = 4/248 (2%) Strand=Plus/Minus Query 94762 TTTTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTT 94821 |||| |||| ||| || || ||||| | ||| | || | || | ||| ||||| || Sbjct 840688 TTTTACAAAAATTTGCATACCACCTCTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTT 840629 Query 94822 TTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATT 94879 || | || ||||| | | || || || ||| |||| |||||| || |||| || Sbjct 840628 CTGGATATTGTAATC--TGAGAGAGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATC 840571 Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 | | || |||||||||||||||||||||||||| | |||||| || || || | Sbjct 840570 AGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCA 840511 Query 94940 ACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999 | |||||| | | || || || | |||||||||||||| ||||| ||||| ||||| Sbjct 840510 ATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTTACAAAA 840451 Query 95000 ATCTGCAT 95007 || ||||| Sbjct 840450 ATTTGCAT 840443 Score = 116 bits (128), Expect = 3e-21 Identities = 172/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || ||||||| ||| | || | || | |||||||| || || | Sbjct 840910 AAAAATTTGCATACCACCTCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGAT 840851 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || ||||| | | || || || ||| |||||||||||||| |||| || | | | Sbjct 840850 ATTGTAATC--TGAGAGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGT 840793 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || |||||||| ||||||||||||||||| | |||||| || || || | | || Sbjct 840792 TGTTGATCTGGGGGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTA 840733 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 || | | || || || | |||||||||||||| || || ||||| ||||| || ||| Sbjct 840732 TCTGAAGGCTCTACTTCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGC 840673 Query 95006 AT 95007 || Sbjct 840672 AT 840671 Score = 107 bits (118), Expect = 2e-18 Identities = 170/242 (70%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || |||||||| || | || | || | |||||||| || || | Sbjct 839084 AAAAATTTGCATACCACCTCTCAACCGGAGTACAAGATGGAGGGTAGATTCTTTCTGGAT 839025 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || ||||| | | || || || ||| |||| |||||| || |||| || || | Sbjct 839024 ATTGTAATC--TGAGAGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAAACGC 838967 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || |||||||||||||||||||||||||| | || |||||||| || | | || Sbjct 838966 TGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTA 838907 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| | || || || | || ||||| ||||| || || ||||| ||||| || ||| Sbjct 838906 TCAGACGGTTCCACCTCCAAAGTAATGGTCTTTCCCGTCAGTGTTTTTACAAAAATTTGC 838847 Query 95006 AT 95007 || Sbjct 838846 AT 838845 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| ||||||||||| || |||| || | | || ||||||||||||||||||||||| Sbjct 839228 ATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTT 839169 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || |||||||| || | | || || | | || || || | ||||| Sbjct 839168 GTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGAT 839109 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||| ||||| ||||||||||| || ||||| Sbjct 839108 GGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 839073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447441273506640