Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq74122 118 1e-21 >seq74122 Length=500396 Score = 118 bits (130), Expect = 1e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 21861 CCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAA 21920 ||||||||||||| || ||||||||||| || |||||||| ||||| | || || | Sbjct 189527 CCAAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAGAAATGA 189468 Query 21921 AATATCGTTCGTTATCTGTTAATTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTT 21980 ||| |||| | | | | ||||||| ||| | ||||| ||||||||||| || | Sbjct 189467 AATGCTGTTCATCAGTTTTCAATTTTTCCCAGTGGCCCAAATCCTTTGATAAATCAACCT 189408 Query 21981 CTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATA 22040 |||| ||||| || ||||| ||| || |||||||| |||| || || | |||| Sbjct 189407 CTTCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTTGATATT 189348 Query 22041 TTATTGGAAATATTACAAACCTGTT 22065 || ||||| |||||||| | ||| Sbjct 189347 GAATAGGAAACATTACAAAACGGTT 189323 Score = 116 bits (128), Expect = 4e-21 Identities = 88/104 (85%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 21170 GACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCT 21229 ||||| | |||||||||||||| |||| |||||| || || || ||||| ||||||||| Sbjct 193925 GACATGACGCCCATTTTTTGATATTCACCAACTCTCTTCTCAAAGAAATTAGTCTTTCCT 193866 Query 21230 TCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTT 21273 |||||||| || ||||||||||||||||||||| ||||| || Sbjct 193865 TCCAATGAGATGTGTTCCATAAAATCAAATGGATTCTCAGAGTT 193822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530892355975760