Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq24522 143 7e-29 seq74122 87.8 5e-12 >seq24522 Length=437104 Score = 143 bits (158), Expect = 7e-29 Identities = 302/449 (67%), Gaps = 6/449 (1%) Strand=Plus/Minus Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 ||||| || || |||||||| || | || || ||||||||||| ||||| || | Sbjct 250464 AGCGCCCTGGAGCTTTTGCTATTTACTTAGAACCCTGGCATGCCGATATCTTTGACTTCC 250405 Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949 |||| | || || || ||||| || ||| ||| || || || |||||||||| | Sbjct 250404 TTGATTGCAAAAAGAATACAGGAAAGGATGAACAGCGAGCCCGAGACTTGTTCTATGCCC 250345 Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTT 364009 | ||| || |||| | ||| ||||| || || || | | | ||||| || | | | Sbjct 250344 TCTGGATTCCTGATCTTTTCATGAAACGAGTTGAAGAAAATGGTGATTGGACATTGATGT 250285 Query 364010 GCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACG 364069 | || | ||||| ||||| ||||| ||||| ||||| | || | || | | || Sbjct 250284 GTCCCAATGAATGCCCAGGCCTTTCGGATGTTTGGGGAAAAGAATTTGAAGACTTGTATA 250225 Query 364070 AAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTC---CCGCACAGAAGCTATGGT 364126 | |||||| | || || | |||| | || || || ||||| | |||| Sbjct 250224 TCAGTTATGAAAAAGCTGGTAAAG---GTAAAAGAACTCTGAAAGCTCAGAAAGTCTGGT 250168 Query 364127 TTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGT 364186 ||| | || || | || | || || || ||||| || ||| ||||||| ||||| | Sbjct 250167 ATGCAGTTATAGAAGCTCAAACCGAAACTGGTACACCTTACATGCTGTACAAGGATTCTT 250108 Query 364187 GCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCG 364246 | ||||||||| |||||| || ||||||| ||||| | || || ||||||| | Sbjct 250107 GTAACCGCAAGAGCAACCAACAAAACCTTGGGACAATAAAATGCAGTAATTTATGTACAG 250048 Query 364247 AGATTATTGAATACACCGCTCCCGACGAG 364275 | ||| |||||||||| || || || ||| Sbjct 250047 AAATTGTTGAATACACGGCACCAGATGAG 250019 >seq74122 Length=500396 Score = 87.8 bits (96), Expect = 5e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 22858 AATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAA 22917 ||||||||||| | ||||||| || ||| | ||||||||||| |||||||| || || Sbjct 193831 AATCCATTTGATTTTATGGAACACATCTCATTGGAAGGAAAGACTAATTTCTTTGAGAAG 193890 Query 22918 AGAGTTGGTGAATACCAAAAA 22938 |||||||||||||| |||||| Sbjct 193891 AGAGTTGGTGAATATCAAAAA 193911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300820762809068