Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq15337 122 7e-23 >seq15337 Length=1015838 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||| ||||| | || || |||||||| || ||||| ||||| | Sbjct 840215 ATGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCC 840274 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | |||||| |||||| ||||||||||| ||||| |||||| Sbjct 840275 GACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAA 840334 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || |||| ||| || ||||| |||||||| | ||| | | ||||| ||| Sbjct 840335 CAGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCGGATTACAAT 840394 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || ||||||||||| || ||| | || | || ||| | ||||| Sbjct 840395 ATCCAGAAAGAATCTACTCTCCATCTTGTACTCCGACTGAGAGGTGG 840441 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||| ||||| | || || |||||||| || ||||| || || Sbjct 840671 ATGCAAATTTTTGTAAAAACACTCACAGGAAAAACCATCACATTGGAAGTAGAGCCTTCA 840730 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | |||||| |||||| ||||||||||| ||||| |||||| Sbjct 840731 GATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAA 840790 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| ||| || ||||| |||||||| | ||| | | ||||| ||| Sbjct 840791 CAACGTCTGATTTTTGCAGGAAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAAT 840850 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || ||||||||||| || ||| | || | || ||| | ||||| Sbjct 840851 ATCCAGAAAGAATCTACCCTCCATCTTGTACTTCGACTGAGAGGTGG 840897 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||| ||||| | || || |||||||| || ||||| ||||| | Sbjct 840443 ATGCAAATTTTTGTAAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCC 840502 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | |||||| |||||| ||||||||||| |||| |||||| Sbjct 840503 GACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 840562 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || |||| ||| || ||||| ||||||||| | ||| | | ||||| ||| Sbjct 840563 CAGCGTCTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACTCTCTCAGATTACAAT 840622 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || |||||||| || || ||| | || | || || | ||||| Sbjct 840623 ATCCAGAAAGAATCAACTCTCCATCTTGTACTCCGACTAAGAGGTGG 840669 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 ||||||||||||||||| ||||| |||| || || |||||||| |||| |||||| Sbjct 838842 AAAATGCAAATTTTTGTAAAAACACTGACGGGAAAGACCATTACTTTGGAGGTGGAACCG 838901 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 ||| | ||| | ||||| ||| || ||||||||||| |||| ||| Sbjct 838902 TCTGATACAATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGAT 838961 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 ||||| | | |||| ||| || ||||| ||||||||| | || | | ||||| Sbjct 838962 CAACAGCGTTTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACCCTCTCAGATTAC 839021 Query 111364 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||| || ||||||||||| || ||| | || | || || | ||||| Sbjct 839022 AATATCCAGAAAGAATCTACCCTCCATCTTGTACTCCGGTTGAGAGGTGG 839071 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||| ||||| | || || |||||||| || ||||| ||||| Sbjct 840899 ATGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCA 840958 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | ||||| ||| || ||||||||||| |||| |||||| Sbjct 840959 GATACCATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 841018 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || |||| ||| || ||||| |||||||| | ||| | | ||||| ||| Sbjct 841019 CAGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAAT 841078 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || ||||||||||| || ||| | || | || || | ||||| Sbjct 841079 ATCCAGAAAGAATCTACCCTTCATCTTGTACTTCGATTGAGAGGTGG 841125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422257999190800