Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq21081 104 5e-17 seq35966 102 2e-16 seq197 102 2e-16 seq35082 100 6e-16 seq9221 100 6e-16 seq8826 100 6e-16 seq5128 100 6e-16 seq2177 100 6e-16 seq50608 98.7 2e-15 seq10859 89.7 1e-12 seq10855 89.7 1e-12 seq589 84.2 4e-11 >seq21081 Length=52202 Score = 104 bits (114), Expect = 5e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 ||| ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||| Sbjct 50132 AGACAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTT 50073 Query 142559 CGAGCCCCACATCGGGC 142575 |||||||||| | |||| Sbjct 50072 CGAGCCCCACGTTGGGC 50056 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||| Sbjct 34850 TAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGA 34791 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 34790 GCCCCACGTTGGGC 34777 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 41045 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 40986 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 40985 CCCCACGTTGGGC 40973 Score = 100 bits (110), Expect = 6e-16 Identities = 78/91 (86%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| | ||||||||||| | | |||||||||||||| Sbjct 41703 TAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATTTCGGGGTCGTGGGTTCGA 41644 Query 142562 GCCCCACATCGGGCAGAAGTCGCCGTCTTTT 142592 ||||||| | |||| || |||| || |||| Sbjct 41643 GCCCCACGTTGGGC-GA--TCGCGGTTTTTT 41616 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 42729 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 42670 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 42669 CCCCACGTTGGGC 42657 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| || |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 47876 AGCCGGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 47817 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 47816 CCCCACGTTGGGC 47804 >seq35966 Length=398670 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||| Sbjct 21889 TAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGA 21830 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 21829 GCCCCACGTTGGGC 21816 >seq197 Length=351632 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||| Sbjct 6367 TAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGA 6308 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 6307 GCCCCACGTTGGGC 6294 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 3700 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 3641 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 3640 CCCCACGTTGGGC 3628 >seq35082 Length=263869 Score = 100 bits (110), Expect = 6e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 |||| |||||| |||||||||||||||||| | ||||||||||||| | ||||||||||| Sbjct 261370 AGAT-GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTT 261312 Query 142559 CGAGCCCCACATCGGGC 142575 |||||||||| | |||| Sbjct 261311 CGAGCCCCACGTTGGGC 261295 >seq9221 Length=364118 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 250512 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 250453 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 250452 CCCCACGTTGGGC 250440 >seq8826 Length=1900719 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 421892 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 421951 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 421952 CCCCACGTTGGGC 421964 Score = 93.3 bits (102), Expect = 9e-14 Identities = 61/66 (92%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 422364 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCT-GGGGTCGTGGGTTCGAG 422422 Query 142563 CCCCAC 142568 |||||| Sbjct 422423 CCCCAC 422428 >seq5128 Length=347122 Score = 100 bits (110), Expect = 6e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 203022 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 202963 Query 142564 CCCACATCGGGCAGAAG 142580 ||||| | |||| |||| Sbjct 202962 CCCACGTTGGGC-GAAG 202947 >seq2177 Length=1735490 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 1523586 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 1523527 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 1523526 CCCCACGTTGGGC 1523514 >seq50608 Length=382023 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 92525 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 92584 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 92585 CCCACGTTGGGC 92596 Score = 96.9 bits (106), Expect = 7e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| || |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 93455 AGCCTGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 93396 Query 142563 CCCCACATCGGGCAGA 142578 |||||| | |||| || Sbjct 93395 CCCCACGTTGGGCGGA 93380 >seq10859 Length=878161 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||| || Sbjct 687334 GCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGTGC 687275 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 687274 CCCACGTTGGGC 687263 >seq10855 Length=736281 Score = 89.7 bits (98), Expect = 1e-12 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGT-CGTGGGTTCG 142560 ||||| || |||||||||||||||||| | ||||||||||||| | ||| |||||||||| Sbjct 654254 TAGCCTGGCTAGCTCAGTCGGTAGAGCACAAGACTCTTAATCTCGGGGTCCGTGGGTTCG 654313 Query 142561 AGCCCCACATCGGG 142574 |||||||| | ||| Sbjct 654314 AGCCCCACGTTGGG 654327 >seq589 Length=424302 Score = 84.2 bits (92), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 142507 CGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCC 142566 ||||||||| |||||||||||| | | ||||||||||| | |||| |||||||||||||| Sbjct 324302 CGGTTAGCTAAGTCGGTAGAGCACGAAACTCTTAATCTCGGGGTCTTGGGTTCGAGCCCC 324361 Query 142567 ACATCGGGC 142575 || | |||| Sbjct 324362 ACGTTGGGC 324370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1025839380977834