Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq15337 136 3e-27 >seq15337 Length=1015838 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | ||||| | || | ||| | || |||||||| || || |||||||| Sbjct 840672 ATACCACCTCTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCT 840613 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| | ||||| || || | || ||||||||||| || ||| Sbjct 840612 GAGAGAGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGA 840553 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||| || ||||| | ||||| ||||||| | ||| Sbjct 840552 GGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCT 840493 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || || |||||||||||||| ||||| Sbjct 840492 ACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCAT 840443 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | |||| | || | ||| | ||||||||||| || || |||||||| Sbjct 840444 ATACCACCTCTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCC 840385 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| || ||||| || || | || ||||||||||| || || Sbjct 840384 GAGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGG 840325 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||| || ||||| | ||||| ||||||| | ||| Sbjct 840324 GGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCT 840265 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || || ||||| |||||||| ||||| Sbjct 840264 ACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||||||||| || || |||||||| | ||||||| |||||| || ||||| || Sbjct 841095 GTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCCAGCTGTTTCCCT 841036 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || ||||||||||| || |||||||| ||||||||||| |||||| ||| Sbjct 841035 GCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTTGCCTTT 840976 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||||| ||| || | | ||| || |||| || | ||||| || || || ||| Sbjct 840975 ACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGTAAGTGTT 840916 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||| ||||| Sbjct 840915 TTCACAAAAATTTGCAT 840899 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | |||| | || | ||| | ||||||||||| || || |||||||| Sbjct 840900 ATACCACCTCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCT 840841 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| || ||||| || || | || ||||| ||||| || || Sbjct 840840 GAGAGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGG 840781 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||| || ||||| | ||||| ||| || | | || Sbjct 840780 GGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCT 840721 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || || |||||||||||||| ||||| Sbjct 840720 ACTTCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||||||||| || || |||||||| | |||||| |||||| | ||||| || Sbjct 839041 GTAGATTCTTTCTGGATATTGTAATCTGAGAGGGTACGACCATCTTCCAACTGTTTCCCT 838982 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || | ||||||||| || |||||||| ||||||||||| |||||| ||| Sbjct 838981 GCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTTGCCTTT 838922 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||||| || || | | ||| || |||| || | || || || ||||| ||| Sbjct 838921 ACATTTTCAATTGTATCAGACGGTTCCACCTCCAAAGTAATGGTCTTTCCCGTCAGTGTT 838862 Query 114366 TTTACAAAAATCTGCAT 114382 ||||||||||| ||||| Sbjct 838861 TTTACAAAAATTTGCAT 838845 Score = 109 bits (120), Expect = 5e-19 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 114218 AGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAAT 114277 ||||||| |||||| || ||||| || || | || ||||||||||| || |||||||| Sbjct 839237 AGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAAT 839178 Query 114278 GCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTC 114337 ||||||||||| |||||| |||| | ||||| ||| || | | ||| || || Sbjct 839177 ACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTC 839118 Query 114338 CACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||||| || || || ||||| |||||||| ||||| Sbjct 839117 CAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 839073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419357770270488