Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq15337 96.9 3e-15 seq2214 84.2 2e-11 >seq15337 Length=1015838 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| || || || || ||||| || | |||||| || || | ||||| || | Sbjct 840638 TTGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCCAACTGTTTCCCTG 840579 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTT 138537 | | || ||||||||||| || ||||| |||||||||||||| ||| |||| | |||| Sbjct 840578 CAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCT-TGAATTTTGGCTTTT 840520 Query 138538 AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | ||| | ||||||| | || || || | || | ||||| || || || ||| Sbjct 840519 ACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGTAAGTGTT 840460 Query 138598 TTTACAAAAATCTGCAT 138614 ||||||||||| ||||| Sbjct 840459 TTTACAAAAATTTGCAT 840443 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| || | || | ||| | | | || || || || || ||||| || Sbjct 839071 CCACCTCTCAACCGGAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 839012 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || | ||||| || | | | || | ||||||||| || ||||| Sbjct 839011 AGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGGA 838952 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||||||||| ||| ||| |||| | ||| | || || | || |||||| Sbjct 838951 ATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTATCAGACGGTTCCACC 838892 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || ||||| |||||||||||||| ||||| Sbjct 838891 TCCAAAGTAATGGTCTTTCCCGTCAGTGTTTTTACAAAAATTTGCAT 838845 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || || | || | ||| | | | || || || || || ||||| || Sbjct 840897 CCACCTCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 840838 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || || ||||| || | | | || ||||| ||||| || || || Sbjct 840837 AGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGA 840778 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| |||| | ||||| | ||| | ||| || | | ||| || Sbjct 840777 ATACCTTCTTTGTCT-TGAATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTAC 840719 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || || || |||||||||||||| ||||| Sbjct 840718 TTCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| || | || | ||| | | | || || || || || ||||| || Sbjct 841125 CCACCTCTCAATCGAAGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 841066 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || || ||||| || | | | || ||||||||||| || ||||| Sbjct 841065 AGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGA 841006 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||||||||| ||| ||| |||| | ||| | ||| || | | || || Sbjct 841005 ATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACT 840946 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || || || ||||| |||||||| ||||| Sbjct 840945 TCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840899 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || || ||||| || | |||||| || || || ||||| || | | Sbjct 840408 GATTCTTTCTGGATATTGTAATCCGAGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCA 840349 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 | || ||||||||||| || || || |||||||||||||| ||| |||| | ||||| Sbjct 840348 AAAATCAGACGCTGTTGATCTGGGGGAATACCTTCTTTGTC-TTGAATTTTGGCTTTTAC 840290 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | ||||||| | || || || | || | ||||| || || || ||||| Sbjct 840289 ATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTT 840230 Query 138600 TACAAAAATCTGCAT 138614 |||||||| ||||| Sbjct 840229 CACAAAAATTTGCAT 840215 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || || ||||| || | | | || ||||||||||| || ||||| |||||||||||| Sbjct 839227 TCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTG 839168 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| ||| |||| | ||| | ||| || | | || || || | || | Sbjct 839167 TCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGATG 839108 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || || || ||||| |||||||| ||||| Sbjct 839107 GTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 839073 >seq2214 Length=644335 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||||||| | || ||||| | | ||||||||||||||||||||||||| | Sbjct 547416 CCACCTCGCAAACGAAGGACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCTGAC 547357 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| ||||| ||||| | | |||| | | || || || ||||| Sbjct 547356 AGCGTACGGCCATCCTCAAGTTGCTTACCAGCAAAGATCAATCTTTGCTGATCTGGAGGA 547297 Query 138508 ATACCT 138513 || ||| Sbjct 547296 ATTCCT 547291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495321523709280