Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq15337 145 5e-30 >seq15337 Length=1015838 Score = 145 bits (160), Expect = 5e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || || | || | ||| || ||||| ||||| || || |||||||| | Sbjct 840441 CCACCTCTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAG 840382 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| | ||||| || || | |||| ||||||||| || ||| Sbjct 840381 AGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGA 840322 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| ||||||| ||||||| |||| ||||| ||| | |||||| Sbjct 840321 ATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACT 840262 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || |||||||| ||||| || ||||| ||||||||||||||| Sbjct 840261 TCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCATA 840214 Score = 145 bits (160), Expect = 5e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| | || | || | ||| || || || ||||| || || |||||||| | Sbjct 840669 CCACCTCTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAG 840610 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| || ||||| || || | |||| ||||||||| || ||| Sbjct 840609 AGAGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGA 840550 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| ||||||| ||||||| |||| ||||| ||| | |||||| Sbjct 840549 ATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACT 840490 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || |||||||| ||||| || ||||||||||||||||||||| Sbjct 840489 TCCAATGTGATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCATA 840442 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || || | || | ||| |||||||| ||||| || || |||||||| | Sbjct 840897 CCACCTCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 840838 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| | ||||| || || | |||| ||| ||||| || ||| Sbjct 840837 AGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGA 840778 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| ||||||| ||||||| |||| || ||||| | ||||| Sbjct 840777 ATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACT 840718 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || |||||||| ||||| || ||||||||||||||||||||| Sbjct 840717 TCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCATA 840670 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||| | || | |||||||||||| ||||| || || |||||||| | Sbjct 841125 CCACCTCTCAATCGAAGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 841066 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| | ||||| || || | |||| ||||||||| || ||| Sbjct 841065 AGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGA 841006 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||| ||||| || ||||| ||| ||| |||| || ||||| | |||||| Sbjct 841005 ATACCTTCTTTGTCTTGGATCTTTGCCTTT-ACATTTTCAATGGTATCTGAAGGTTCTAC 840947 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || |||||||| ||||| || ||||| ||||||||||||||| Sbjct 840946 TTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCATA 840898 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | ||| |||||||| ||||| || || |||||||| | Sbjct 839071 CCACCTCTCAACCGGAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 839012 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| || ||||| || || | |||||||||||||| || ||| Sbjct 839011 AGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGGA 838952 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||| ||||| || ||||| ||| ||| |||| || ||||| ||| || Sbjct 838951 ATACCTTCTTTGTCTTGGATCTTTGCCTTT-ACATTTTCAATTGTATCAGACGGTTCCAC 838893 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || |||||||| || || ||||| |||||||||||||||||||| || Sbjct 838892 CTCCAAAGTAATGGTCTTTCCCGTCAGTGTTTTTACAAAAATTTGCATTTT 838842 Score = 100 bits (110), Expect = 2e-16 Identities = 118/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| | ||||| || || | |||| ||||||||| || ||||| ||||| ||| Sbjct 839227 TCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTG 839168 Query 15082 TCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAAT 15140 || || ||||| ||| ||| |||| || ||||| | |||||| || || || || Sbjct 839167 TCTTGGATCTTTGCCTTT-ACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGAT 839109 Query 15141 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||||| ||||| || ||||| ||||||||||||||| Sbjct 839108 GGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCATA 839072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356731351283090