Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq15337 95.1 1e-14 >seq15337 Length=1015838 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | ||||| | || | ||| | ||||| ||||| || ||||||||||| Sbjct 841125 CCACCTCTCAATCGAAGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 841066 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || |||||||| || || | |||| ||||| ||||| ||||| Sbjct 841065 AGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGA 841006 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || || ||||| ||| || ||| | | ||| | ||| || | | || ||| Sbjct 841005 ATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACT 840946 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || || || ||||| |||||||| ||||| Sbjct 840945 TCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840899 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| ||||| || ||||||||||| | || ||| ||| || ||||||||||| Sbjct 840867 GTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCCAGCTGTTTTCCT 840808 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | |||| || || ||||| || || || || || ||||| ||| ||| |||| Sbjct 840807 GCAAAAATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTGTCT-TGAATTTTGGCTTT 840749 Query 127037 -AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | ||| | ||| || | | ||| ||||| | || | ||||| || || || || Sbjct 840748 TACATTTTCAATGGTATCTGAAGGCTCTACTTCCAATGTGATGGTTTTTCCTGTGAGTGT 840689 Query 127096 TTTTACAAAAATCTGCAT 127113 |||||||||||| ||||| Sbjct 840688 TTTTACAAAAATTTGCAT 840671 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | || ||| | || | ||| | || || ||||| || ||||||||||| Sbjct 840669 CCACCTCTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAG 840610 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || | |||||| || || | |||| ||||| ||||| ||||| Sbjct 840609 AGAGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGA 840550 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTG-AGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || ||||| ||| ||| |||| | | ||| | ||||| | | || || Sbjct 840549 ATACCTTCTTTGTCT-TGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTAC 840491 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| || || || |||||||||||||| ||||| Sbjct 840490 TTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCAT 840443 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| ||||| || ||||||||||| | || ||| ||| || |||||||| || Sbjct 840411 GTAGATTCTTTCTGGATATTGTAATCCGAGAGAGTACGACCATCTTCCAGCTGTTTCCCT 840352 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || | |||| ||||| ||||| || || || || || |||| | ||| ||| || || Sbjct 840351 GCAAAAATCAGACGCTGTTGATCTGGGGGAATACCTTCTTTGT-CTTGAATTTTGGCTTT 840293 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | ||| | ||||| | | || ||||| | || | ||||| || || || || Sbjct 840292 TACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTTTCCTGTAAGTGT 840233 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| |||||||| ||||| Sbjct 840232 TTTCACAAAAATTTGCAT 840215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474599286145760