Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq15337 129 5e-25 >seq15337 Length=1015838 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || |||||||| || |||||||| ||||| || || | ||| ||| Sbjct 840651 ACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCC 840592 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || ||||| ||||| | |||| || || || || || ||||| |||||||| |||||| Sbjct 840591 AACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGA 840532 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| ||| | ||| | |||||||||| || ||||| | || | ||||| Sbjct 840531 ATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTTT 840472 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||||||||||||||||||| Sbjct 840471 CCTGTAAGTGTTTTTACAAAAATTTGCAT 840443 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || ||||| || |||||||| ||||| || || | ||| ||| Sbjct 840879 ACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCC 840820 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||||||||||| | |||| ||||| || || || ||||| |||||||| |||||| Sbjct 840819 AGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTTGA 840760 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| ||| | ||| | ||| || |||| ||| ||||| | || | ||||| Sbjct 840759 ATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACTTCCAATGTGATGGTTTTT 840700 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||||||||||||||||||| Sbjct 840699 CCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || ||||| || |||||||| ||||| || || | ||| ||| Sbjct 840423 ACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAGAGAGTACGACCATCTTCC 840364 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||||| ||||| | |||| || || || || || ||||| |||||||| |||||| Sbjct 840363 AGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGAATACCTTCTTTGTCTTGA 840304 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| ||| | ||| | |||||||||| || ||||| | || | ||||| Sbjct 840303 ATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTTT 840244 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||| |||||||||||||| Sbjct 840243 CCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || ||||| || |||||||| ||||| || ||| | ||| ||| Sbjct 839053 ACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGGGTACGACCATCTTCC 838994 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || ||||| ||||| | ||||| || || || || || ||||| |||||||| ||||| Sbjct 838993 AACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGG 838934 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || ||| || | ||| | || || || | || || || | ||||| || || Sbjct 838933 ATCTTTGCCTTTACATTTTCAATTGTATCAGACGGTTCCACCTCCAAAGTAATGGTCTTT 838874 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||||||||||||||||||| Sbjct 838873 CCCGTCAGTGTTTTTACAAAAATTTGCAT 838845 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || ||||| || |||||||| ||||| || || | ||| ||| Sbjct 841107 ACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCC 841048 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||||| ||||| | |||| || || || || || ||||| |||||||| ||||| Sbjct 841047 AGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGG 840988 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || ||| || | ||| | ||| || |||| || ||||| | || | ||||| Sbjct 840987 ATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGATGGTTTTT 840928 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||| |||||||||||||| Sbjct 840927 CCTGTAAGTGTTTTCACAAAAATTTGCAT 840899 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| |||| ||||| ||||| | |||| || || || || || ||||| |||||||| Sbjct 839228 ATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTT 839169 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || ||| || | ||| | ||| || |||| || ||||| | || | Sbjct 839168 GTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGAT 839109 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || || ||||| |||||||||||||| Sbjct 839108 GGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 839073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451146235833040