Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq74122 87.8 2e-12 >seq74122 Length=500396 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/208 (70%), Gaps = 5/208 (2%) Strand=Plus/Minus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 |||| || | | ||| | |||||| ||| || ||| ||||||| ||| ||||||| Sbjct 192225 CCTCATCTCTGCTGATTAATTCATTGCTGAATGTCAAACCAGGCATGATACCACGCTTCT 192166 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658 | ||||||||||| ||| ||| || |||||||| ||||| || || || | || || | Sbjct 192165 TTAACCAGAAAATAGCAGCAAAAGAACCAGAGAAAAAGATTCCTTCTACCCCAGCAAAAG 192106 Query 127659 CAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCGCCCACTGT 127717 ||| | |||||| | | | ||||| |||| | || ||| |||| ||||| | Sbjct 192105 CAACAACACGCTCTGAATA----TGGGACCTTGTCAGAAATCCATTTCAAAGCCCAATCA 192050 Query 127718 GCCTTTTTCTCGATACATGGGACGGTCT 127745 || || || | || ||||| | |||| Sbjct 192049 GCTTTCTTTTTAATGCATGGCATTGTCT 192022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612344036361840