Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq15337 129 1e-24 >seq15337 Length=1015838 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || || || || |||| ||||| || | | ||| | |||||| Sbjct 841110 AGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCT 841051 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || || || || || |||||||| || || ||| ||| |||||| || Sbjct 841050 TCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCT 840991 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| || ||| | ||| |||| | |||||| ||||| ||||| || Sbjct 840990 TGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGATGGTT 840931 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||||||||||||||| Sbjct 840930 TTTCCTGTAAGTGTTTTCACAAAAATTTG 840902 Score = 125 bits (138), Expect = 2e-23 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || ||||| |||||||| || || || |||| ||||| || | | ||| | Sbjct 840432 AGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAGAGAGTACGA 840373 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||||||| || || || || || |||||||| || || || ||| |||||| Sbjct 840372 CCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGAATACCTTCT 840313 Query 199532 CGCTCCTGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || ||||| ||| |||| || ||| | ||||| | | |||||| ||||| || Sbjct 840312 TTGTCTTGAAT-TTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGT 840254 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || ||||||||||||||||| Sbjct 840253 GATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTG 840218 Score = 122 bits (134), Expect = 2e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || ||||| |||||||| || || || |||| ||||| || | | ||| | Sbjct 840660 AGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGA 840601 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||| ||| || || || || || |||||||| || || ||| ||| |||||| Sbjct 840600 CCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCT 840541 Query 199532 CGCTCCTGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || ||||| ||| |||| || ||| | ||||| | | |||||| ||||| || Sbjct 840540 TTGTCTTGAAT-TTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGT 840482 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || ||||| ||||||||||| Sbjct 840481 GATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTG 840446 Score = 122 bits (134), Expect = 2e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || ||||| ||||| || || || || |||| ||||| || | | ||| | Sbjct 840888 AGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGA 840829 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||||||| ||||| || || || ||||| || || || || ||| |||||| Sbjct 840828 CCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGAATACCTTCT 840769 Query 199532 CGCTCCTGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || ||||| ||| |||| || ||| | ||| |||| | ||||| ||||| || Sbjct 840768 TTGTCTTGAAT-TTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACTTCCAATGT 840710 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || ||||| ||||| ||||||||||| Sbjct 840709 GATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTG 840674 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||||||| || || || || || |||||||| || || ||| ||| |||||| Sbjct 839230 CCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCT 839171 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || |||||| ||| || ||| | ||| |||| | |||||| ||||| ||| Sbjct 839170 TTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTG 839111 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||||||||||||||| Sbjct 839110 ATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTG 839076 Score = 107 bits (118), Expect = 5e-18 Identities = 155/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||| || || || || |||| ||||| || | | || | |||||| Sbjct 839056 AGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGGGTACGACCATCT 838997 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||| || || || || || | |||||| || || ||| ||| |||||| || Sbjct 838996 TCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCT 838937 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| || ||| | || || | | ||| || ||||| || || ||| Sbjct 838936 TGGATCTTTGCCTTTACATTTTCAATTGTATCAGACGGTTCCACCTCCAAAGTAATGGTC 838877 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || ||||| || ||||| ||||||||||| |||||| Sbjct 838876 TTTCCCGTCAGTGTTTTTACAAAAATTTG---CATTTT 838842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176630574392158