Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq50794 176 2e-38 seq46331 136 2e-26 seq15337 129 2e-24 seq1929 86.0 2e-11 >seq50794 Length=628393 Score = 176 bits (194), Expect = 2e-38 Identities = 339/491 (69%), Gaps = 12/491 (2%) Strand=Plus/Plus Query 450942 TTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAGAAATTATAGCAAATGACCAAGGAT 451001 ||||| |||| || |||| | | |||||| ||| ||||| || |||||||| || ||| Sbjct 295631 TTTCA-GTGTCGGCGTTTTCAAGAATGGACGTGTGGAAATAATTGCAAATGATCAGGGAA 295689 Query 451002 CACGAACTACTCCTTCATGGGTAAGTTTTACGG---ATTCAGAAAGACTTTTAGGGCAAG 451058 || | |||||| |||| || ||| || | || ||| | ||| | || | | Sbjct 295690 ATCGTATTACTCCATCATATGTGGCTTTCACCGGTGATGGTGAACGTCTTATCGGAGATG 295749 Query 451059 CTGCTAAA--TCAATGGTAAATTCAAATGCCA-AAAACACAGTATATGATGCTAAACGTT 451115 | |||||| ||| | | | ||| ||| |||||||| | | ||||| || | | Sbjct 295750 CAGCTAAAAATCAGTTGACCAG-CAAC--CCAGAAAACACAATCTTTGATGTCAAGAGAT 295806 Query 451116 TAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAGAAAAAATTCTTTTCTTATG 451175 ||||||| |||| || || ||| | |||| || | || | ||||||| ||| | Sbjct 295807 TAATTGGTCGTACGTGGGACGATAAATCTGTGCAGCATGATATCAAATTCTACCCTTTTA 295866 Query 451176 ATGTAGTAAATCAAAAAGGA-AAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAA 451234 | || | || ||| || | || ||| || | |||| | || ||||||| ||| Sbjct 295867 AAGTTATCAA-CAAGAACAACAAACCCCATGTCCAAGCCACAGTTAGTGGTGAAATGAAA 295925 Query 451235 ACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAA 451294 ||||||||||||||||||||||| ||||||||||| ||| |||| |||| |||||| Sbjct 295926 ACTTTTGCTCCTGAAGAAATTTCTGCTATGGTTCTTGGTAAGATGAGGGAAATTGCAGAA 295985 Query 451295 CAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGAT 451354 || | ||| | ||| |||| || ||||||| || ||||||||||||||| Sbjct 295986 GCTTACTTGGGTAAAGAAATTAAAAATGCTGTGGTTACTGTACCTGCTTATTTCAATGAT 296045 Query 451355 GCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATT 451414 || || | ||||| || |||||||| ||| ||||| || | ||||| | |||| Sbjct 296046 GCCCAGAGACAAGCTACCAAAGATGCTGGAACAATTGCAGGCCTCAATGTAATGAGAATC 296105 Query 451415 ATTAATGAACC 451425 ||||||||||| Sbjct 296106 ATTAATGAACC 296116 >seq46331 Length=342331 Score = 136 bits (150), Expect = 2e-26 Identities = 240/350 (69%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 452073 TTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGA 452132 || |||| | ||||| | || || || | || ||||||| || ||||| | |||| Sbjct 205349 TTTTGTTGCTTGATGTTGCCCCACTCTCCATGGGTATTGAAACTGCAGGTGGTGTAATGA 205290 Query 452133 CTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAG 452192 || ||||||||| || || | ||||| ||| ||| ||||||||| | ||| Sbjct 205289 CTTCCTTAATTAAAAGAAACACAACCATTCCAACCAAACAGACTCAAACATTCACCACAT 205230 Query 452193 CAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACAC 452252 |||||||||||||||||| |||||| |||| ||||||||||||| ||||||| Sbjct 205229 ATTCTGATAACCAACCAGGTGTGCTTATTCAGGTGTATGAAGGAGAACGTACAATGACTA 205170 Query 452253 GAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAA 452312 |||||| ||| || ||| ||||| | | ||||| || || || || Sbjct 205169 AAGATAACAATCTCCTTGGAAAATTTGAATTAACCGGGATTCCACCAGCTCCGAGAGGTG 205110 Query 452313 CTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAG 452372 || || |||||| | || | |||| ||||||| ||||||||| | ||||| || Sbjct 205109 TGCCACAGATTGAAGTCACTTTTGATATTGATGCTAATGGTATTTTGAATGTATCGGCCA 205050 Query 452373 TTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAA 452422 ||| || | || ||| | | |||||||| ||||||||||| ||| Sbjct 205049 CTGATAAGAGTACAGGCAAAGAAAATAAAATTACTATTACTAATGACAAA 205000 Score = 114 bits (126), Expect = 5e-20 Identities = 105/133 (79%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| ||| |||||||||| || || |||||||| | || | || || |||||||||| Sbjct 207243 ATGCTGTAGTTACTGTTCCTGCATACTTCAATGACTCTCAGAGACAGGCCACTAAAGATG 207184 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || ||||||||| | |||||| | || || |||||||||||||||||||||||| Sbjct 207183 CTGGTACCATTGCTGGTCTGAATGTTTTGCGTATAATTAATGAACCTACAGCAGCTGCTA 207124 Query 451440 TAGCATATGGACT 451452 | || ||||| || Sbjct 207123 TTGCTTATGGTCT 207111 >seq15337 Length=1015838 Score = 129 bits (142), Expect = 2e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || |||||||| || || ||||| || || | || || ||| | || Sbjct 840215 ATGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCC 840274 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | ||| ||||||||||| || ||||| ||||| || |||||| Sbjct 840275 GACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAA 840334 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | ||||| |||||||||| || |||||||| | ||| | ||||||| ||| Sbjct 840335 CAGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCGGATTACAAT 840394 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | || || | || || || | ||| | |||||||||| Sbjct 840395 ATCCAGAAAGAATCTACTCTCCATCTTGTACTCCGACTGAGAGG 840438 Score = 129 bits (142), Expect = 2e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || |||||||| || || ||||| || || | || || || | || Sbjct 840671 ATGCAAATTTTTGTAAAAACACTCACAGGAAAAACCATCACATTGGAAGTAGAGCCTTCA 840730 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||||| | | ||| ||||||||||| || ||||| ||||| || |||||| Sbjct 840731 GATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAA 840790 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | ||||| |||| ||||| || |||||||| | ||| | | ||||| ||| Sbjct 840791 CAACGTCTGATTTTTGCAGGAAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAAT 840850 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | || || | || || || | ||| | |||||||||| Sbjct 840851 ATCCAGAAAGAATCTACCCTCCATCTTGTACTTCGACTGAGAGG 840894 Score = 127 bits (140), Expect = 8e-24 Identities = 138/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || ||||||||||| || || || |||||| | || || ||| | || Sbjct 838844 AATGCAAATTTTTGTAAAAACACTGACGGGAAAGACCATTACTTTGGAGGTGGAACCGTC 838903 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | | || ||| || ||||| || ||||| |||||||| ||||| Sbjct 838904 TGATACAATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCA 838963 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||||| ||||| |||||||||| | |||||||| | || | | ||||| || Sbjct 838964 ACAGCGTTTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACCCTCTCAGATTACAA 839023 Query 391229 TAT 391231 ||| Sbjct 839024 TAT 839026 Score = 125 bits (138), Expect = 3e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || |||||||| || || ||||| || || | || || ||| | || Sbjct 840443 ATGCAAATTTTTGTAAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCC 840502 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | ||| ||||||||||| || ||||| |||||||| |||||| Sbjct 840503 GACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 840562 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | ||||| |||||||||| | |||||||| | ||| | | ||||| ||| Sbjct 840563 CAGCGTCTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACTCTCTCAGATTACAAT 840622 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | || || |||| || || | ||| | |||| ||||| Sbjct 840623 ATCCAGAAAGAATCAACTCTCCATCTTGTACTCCGACTAAGAGG 840666 >seq1929 Length=394100 Score = 86.0 bits (94), Expect = 2e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 |||| | ||||| ||| | || ||||||| ||||||||||||||| | ||| |||| || Sbjct 343872 AGCAGTCGGAATAGATTTGGGGACCACCTATTCATGTGTAGGTGTCTTTCAACATGGCAA 343813 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCC 451014 || ||||| || || |||||||||||| || || ||||| Sbjct 343812 GGTTGAAATCATTGCCAATGACCAAGGAAACCGTACCACTCC 343771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1971878940744792