Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq15337 161 2e-34 seq24522 86.0 1e-11 >seq15337 Length=1015838 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||| | ||||| || ||||| || ||||| || ||||||||||| | ||||| Sbjct 840664 TCTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAGAGAGT 840605 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | ||| || ||||| || || || || ||||| ||||||||||| || Sbjct 840604 ACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACC 840545 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||||||||| || || || ||||| ||||| ||| ||| ||||| | Sbjct 840544 TTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAA 840485 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || |||||||| | |||||||| || | |||||| Sbjct 840484 TGTGATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCAT 840443 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| || || ||||| || ||||||||||| | ||||| | |||||||| Sbjct 841107 ACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTCC 841048 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || ||||| || || || || ||||| ||||||||||| |||||||||||||| Sbjct 841047 AGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGG 840988 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||| || || |||||||| || ||| ||| ||||| | || | || ||| Sbjct 840987 ATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGATGGTTTTT 840928 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || || | |||||| Sbjct 840927 CCTGTAAGTGTTTTCACAAAAATTTGCAT 840899 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||| | ||||| || ||||| || ||||| || ||||||||||| | ||||| Sbjct 840436 TCTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAGAGAGT 840377 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || ||||| || || || || ||||| ||||| ||||| || Sbjct 840376 ACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGAATACC 840317 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||||||||| || || || ||||| ||||| ||| ||| ||||| | Sbjct 840316 TTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAA 840257 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || |||||||| | ||||| || || | |||||| Sbjct 840256 TGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||| | ||||| || || || || ||||| || ||||||||||| | ||||| Sbjct 840892 TCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGT 840833 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || ||||| || || || |||||||| ||||| ||||| || Sbjct 840832 ACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGAATACC 840773 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||||||||| || || || |||||||| || ||| || ||||| | Sbjct 840772 TTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACTTCCAA 840713 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || |||||||| | |||||||| || | |||||| Sbjct 840712 TGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 150 bits (166), Expect = 4e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || || ||||| || ||||||||||| | || || | |||||||| Sbjct 839053 ACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGGGTACGACCATCTTCC 838994 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||| || ||||| || || | || ||||| ||||||||||| |||||||||||||| Sbjct 838993 AACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTGG 838934 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||| || || ||||| || || || |||||| || | |||| |||||| Sbjct 838933 ATCTTTGCCTTTACATTTTCAATTGTATCAGACGGTTCCACCTCCAAAGTAATGGTCTTT 838874 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || |||| |||||||| || | |||||||| Sbjct 838873 CCCGTCAGTGTTTTTACAAAAATTTGCATTT 838843 Score = 125 bits (138), Expect = 2e-23 Identities = 128/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 194974 AGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGA 195033 ||||| | |||||||| ||||| || ||||| || || || || ||||| ||||||||| Sbjct 839239 AGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGA 839180 Query 195034 ATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACT 195093 || |||||||||||||| || ||| ||| || || |||||||| || ||| ||| ||| Sbjct 839179 ATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACT 839120 Query 195094 TCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || | || |||||||| | ||||| || || | |||||| Sbjct 839119 TCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 839073 >seq24522 Length=437104 Score = 86.0 bits (94), Expect = 1e-11 Identities = 129/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 160513 CTGGCACGTTGACATCTTTGACTTTGTCGATGCGAAAAAGC---CCGGAGGTGATGACCT 160569 |||||| | || ||||||||||| | ||| |||||| | ||| ||||| | Sbjct 250430 CTGGCATGCCGATATCTTTGACTTCCTTGATTGCAAAAAGAATACAGGAAAGGATGAACA 250371 Query 160570 GATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT 160629 | ||||| |||| | ||||| ||| |||||| | | |||||||||||||| |||| Sbjct 250370 GC---GAGCCCGAGACTTGTTCTATGCCCTCTGGATTCCTGATCTTTTCATGAAACGAGT 250314 Query 160630 GAAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGT 160689 |||| ||||| ||||||| | | |||||||||||| || || ||| ||||| Sbjct 250313 TGAAGAAAATGGTGATTGGACATTGATGTGTCCCAATGAATGCCCAGGCCTTTCGGATGT 250254 Query 160690 TT 160691 || Sbjct 250253 TT 250252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1107325518749958