Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq74122 109 6e-19 >seq74122 Length=500396 Score = 109 bits (120), Expect = 6e-19 Identities = 148/205 (72%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 37555 TCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATT 37614 ||||| | |||||||||||||| || |||||||| || ||||| ||||| | |||| Sbjct 189532 TCTTACC-AAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAG 189474 Query 37615 TTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAAT 37674 || ||||| ||||||| || ||||||| ||| | | ||| |||||||||| Sbjct 189473 AAATGAAATGCTGTTCATCAGTTTTCAATTTTTCCCAGTGGCCCAAATCCTTTGATAAAT 189414 Query 37675 CAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCAT 37734 |||| || || || ||||| ||| || | || |||||||| |||| || || | Sbjct 189413 CAACCTCTTCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTT 189354 Query 37735 TATGTTGTATTGGAAATATTACAAA 37759 || ||| || ||||| |||||||| Sbjct 189353 GATATTGAATAGGAAACATTACAAA 189329 Score = 104 bits (114), Expect = 3e-17 Identities = 81/94 (86%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| || ||||||||||||||||| ||||||| |||| || || ||||| |||||||||| Sbjct 193923 CATGACGCCCATTTTTTGATATTCACCAACTC-TCTTCTCAAAGAAATTAGTCTTTCCTT 193865 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | | ||| || | ||||||||||||||||||||| Sbjct 193864 CCAATGAGATGTGTTCCATAAAATCAAATGGATT 193831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591193811770960