Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq15337 176 8e-39 >seq15337 Length=1015838 Score = 176 bits (194), Expect = 8e-39 Identities = 181/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||||| ||||||||| ||||| | |||| ||||| ||||| Sbjct 840907 AATTTGCATACCACCTCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATT 840848 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || | || | | ||| || | |||||||| |||||||| | | ||||| Sbjct 840847 GTAATCTGAGAGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTG 840788 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || |||||||| ||||| ||||||| ||||| |||| ||| ||||| || Sbjct 840787 ATCTGGGGGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGA 840728 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||| ||||| | || || ||||| ||||| || ||||||||||| |||||||| Sbjct 840727 AGGCTCTACTTCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 170 bits (188), Expect = 3e-37 Identities = 180/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| | ||| ||||| ||||| | || | ||||| ||||| Sbjct 840679 AATTTGCATACCACCTCTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATT 840620 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || | || | | ||| || || ||||| || |||||||| | | |||||| Sbjct 840619 GTAATCTGAGAGAGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTG 840560 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || |||||||| ||||| ||||||| ||||| |||| |||||| ||||| Sbjct 840559 ATCTGGAGGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGA 840500 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| | || || ||||| ||||| || ||||||||||| |||||||| Sbjct 840499 AGGTTCTACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCAT 840443 Score = 167 bits (184), Expect = 4e-36 Identities = 179/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||||| ||| ||||| ||||| | |||| ||||| ||||| Sbjct 840451 AATTTGCATACCACCTCTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATT 840392 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || | || | | ||| || | ||||| || |||||||| | | |||||| Sbjct 840391 GTAATCCGAGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTG 840332 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || |||||||| ||||| ||||||| ||||| |||| |||||| ||||| Sbjct 840331 ATCTGGGGGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGA 840272 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| | || || ||||| ||||| || ||||| ||||| |||||||| Sbjct 840271 AGGTTCTACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Score = 161 bits (178), Expect = 2e-34 Identities = 178/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||||||||||||||| ||||| | |||| ||||| ||||| Sbjct 841135 AATTTGCATACCACCTCTCAATCGAAGTACAAGATGAAGGGTAGATTCTTTCTGGATATT 841076 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || | || | | ||| || | ||||| || |||||||| | | |||||| Sbjct 841075 GTAATCTGAGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTG 841016 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || |||||||| ||||| || || | |||| |||| ||| ||||| || Sbjct 841015 ATCTGGAGGAATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGA 840956 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| | || || ||||| ||||| || ||||| ||||| |||||||| Sbjct 840955 AGGTTCTACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840899 Score = 159 bits (176), Expect = 6e-34 Identities = 188/253 (74%), Gaps = 1/253 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||| || ||||| ||||| | |||| ||||| ||||| Sbjct 839081 AATTTGCATACCACCTCTCAACCGGAGTACAAGATGGAGGGTAGATTCTTTCTGGATATT 839022 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || | || | | ||| || || ||||| || |||||||| || | |||||| Sbjct 839021 GTAATCTGAGAGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTG 838962 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || |||||||| ||||| || || | |||| |||| ||| ||||| || Sbjct 838961 ATCTGGAGGAATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTATCAGA 838902 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 | || || || | ||| || || || || || || ||||||||||| ||||||||||| Sbjct 838901 CGGTTCCACCTCCAAAGTAATGGTCTTTCCCGTCAGTGTTTTTACAAAAATTTGCATTTT 838842 Query 193364 ATTAGTAAAATAA 193376 | |||||| || Sbjct 838841 GCT-GTAAAAGAA 838830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897948722731680