Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq15337 140 6e-28 >seq15337 Length=1015838 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| || || | ||| | ||| | ||||| ||||| |||||| ||||| Sbjct 840444 ATACCACCTCTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCC 840385 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| ||||| || ||||| || | | ||||||||| || Sbjct 840384 GAGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGG 840325 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| ||||||||| |||| || || | |||| Sbjct 840324 GGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCT 840265 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || |||||||| || || | |||||| | ||| || ||||| Sbjct 840264 ACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| || || | ||| | ||| | ||| | ||||| |||||| ||||| Sbjct 840672 ATACCACCTCTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCT 840613 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| ||||| ||||| || ||||| || | | ||||||||| || Sbjct 840612 GAGAGAGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGA 840553 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| ||||||||| |||| || || | |||| Sbjct 840552 GGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCT 840493 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || |||||||| || || | |||||| | ||| || ||||| Sbjct 840492 ACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCAT 840443 Score = 136 bits (150), Expect = 8e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | || | ||| | ||| | |||| ||||| |||||| ||||| Sbjct 839074 ATACCACCTCTCAACCGGAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCT 839015 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| ||||| ||||| || ||||| || || | ||||||||| || Sbjct 839014 GAGAGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGA 838955 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| || || |||||||| || | ||| |||| ||| Sbjct 838954 GGAATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTATCAGACGGTTCC 838895 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || | ||||||||| || || || | |||||| | ||| || |||||||| Sbjct 838894 ACCTCCAAAGTAATGGTCTTTCCCGTCAGTGTTTTTACAAAAATTTGCATTTT 838842 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| || || | ||| | ||| | |||| ||||| |||||| ||||| Sbjct 840900 ATACCACCTCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCT 840841 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| ||||| || ||||| || | | |||||||| || Sbjct 840840 GAGAGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGG 840781 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| ||||||||| || | |||||| | ||| Sbjct 840780 GGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCT 840721 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || |||||||| || || | |||||| | ||| || ||||| Sbjct 840720 ACTTCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | || | ||| | ||| | |||| ||||| |||||| ||||| Sbjct 841128 ATACCACCTCTCAATCGAAGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCT 841069 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| ||||| || ||||| || | | ||||||||| || Sbjct 841068 GAGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGA 841009 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| || || |||||||| || | |||||| | |||| Sbjct 841008 GGAATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCT 840949 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || |||||||| || || | |||||| | ||| || ||||| Sbjct 840948 ACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982566837249900