Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq15337 140 3e-28 seq2214 87.8 2e-12 >seq15337 Length=1015838 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||| || || | ||||||||| | | Sbjct 840899 ATGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCA 840958 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||||||||||||||||||| || ||||| |||||| Sbjct 840959 GATACCATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 841018 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| ||||| |||||||||||||| ||| | | | |||||||| || Sbjct 841019 CAGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAAT 841078 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || ||||| || || || | || | |||||| | || || Sbjct 841079 ATCCAGAAAGAATCTACCCTTCATCTTGTACTTCGATTGAGAGGTGG 841125 Score = 138 bits (152), Expect = 1e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || || || ||||| | || || ||| | | Sbjct 838845 ATGCAAATTTTTGTAAAAACACTGACGGGAAAGACCATTACTTTGGAGGTGGAACCGTCT 838904 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| ||||| ||||||||||||||||||||| || ||||| |||||| Sbjct 838905 GATACAATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 838964 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||| ||||| ||||||||| |||| ||| | | | | |||||||| || Sbjct 838965 CAGCGTTTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACCCTCTCAGATTACAAT 839024 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || || ||||| || || || |||| Sbjct 839025 ATCCAGAAAGAATCTACCCTCCATCTTG 839052 Score = 132 bits (146), Expect = 4e-26 Identities = 155/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||| || || | ||||||||| | || Sbjct 840443 ATGCAAATTTTTGTAAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCC 840502 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| |||||| || || |||||||||||||| || ||||| |||||| Sbjct 840503 GACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 840562 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| ||||| ||||||||| |||| ||| | | | |||||||| || Sbjct 840563 CAGCGTCTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACTCTCTCAGATTACAAT 840622 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || || ||||| || || || |||| Sbjct 840623 ATCCAGAAAGAATCAACTCTCCATCTTG 840650 Score = 129 bits (142), Expect = 5e-25 Identities = 122/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||| || || | ||||||||| | | Sbjct 839073 ATGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCA 839132 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||||||||||||||||||| || ||||| |||||| Sbjct 839133 GATACCATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 839192 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || ||| |||| ||||| |||||||||||||| ||| Sbjct 839193 CAGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGAT 839228 Score = 129 bits (142), Expect = 5e-25 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||| || || | ||||||||| | || Sbjct 840215 ATGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCC 840274 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| |||||| || || |||||||||||||| || || || |||||| Sbjct 840275 GACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAA 840334 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| ||||| |||||||||||||| ||| | | | || ||||| || Sbjct 840335 CAGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCGGATTACAAT 840394 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || || ||||| || || || |||| Sbjct 840395 ATCCAGAAAGAATCTACTCTCCATCTTG 840422 Score = 120 bits (132), Expect = 3e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||| || || | |||||||| | | Sbjct 840671 ATGCAAATTTTTGTAAAAACACTCACAGGAAAAACCATCACATTGGAAGTAGAGCCTTCA 840730 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| |||||| || || |||||||||||||| || || || |||||| Sbjct 840731 GATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAA 840790 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| |||| ||||| || ||||||||||| ||| | | | |||||||| || Sbjct 840791 CAACGTCTGATTTTTGCAGGAAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAAT 840850 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || || ||||| || || || |||| Sbjct 840851 ATCCAGAAAGAATCTACCCTCCATCTTG 840878 >seq2214 Length=644335 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864 |||||| ||||| ||||| ||| | ||||||||||| || || || || |||||| | Sbjct 547291 AGGAATTCCTCCAGATCAGCAAAGATTGATCTTTGCTGGTAAGCAACTTGAGGATGGCCG 547350 Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924 | ||||||| || |||||||||||||| || || || || ||||| | || ||||| Sbjct 547351 TACGCTGTCAGACTACAACATTCAAAAGGAGTCAACCCTTCATTTGGTCCTTCGTTTGCG 547410 Query 24925 CGGAGG 24930 || || Sbjct 547411 AGGTGG 547416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449044627892720