Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq15337 172 9e-38 seq65953 89.7 8e-13 seq77582 84.2 3e-11 >seq15337 Length=1015838 Score = 172 bits (190), Expect = 9e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||||||| | ||||||||||| || || | || ||||||| | || Sbjct 840444 TGCAAATTTTTGTAAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCCG 840503 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||||||| ||||| ||| |||||||| ||||| || ||||||| Sbjct 840504 ACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAAC 840563 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || ||||||||||| ||||| || || ||| | | || | ||||||| |||| Sbjct 840564 AGCGTCTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACTCTCTCAGATTACAATA 840623 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || |||||||| ||| ||||| | ||| | ||| ||||||| |||| Sbjct 840624 TCCAGAAAGAATCAACTCTCCATCTTGTACTCCGACTAAGAGGTGGTA 840671 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | ||||||||||| || || | || ||||||| | || Sbjct 840216 TGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCCG 840275 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||||||| ||||| ||| |||||||| ||||| || ||||||| Sbjct 840276 ACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAAC 840335 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || ||||||||||| ||||| | || ||| | | || | | ||||| |||| Sbjct 840336 AGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCGGATTACAATA 840395 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || |||||||| ||| ||||| | ||| | ||| | ||||| |||| Sbjct 840396 TCCAGAAAGAATCTACTCTCCATCTTGTACTCCGACTGAGAGGTGGTA 840443 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||||||| | ||||||||||| || || | || ||||| | | | Sbjct 840672 TGCAAATTTTTGTAAAAACACTCACAGGAAAAACCATCACATTGGAAGTAGAGCCTTCAG 840731 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||||||| ||||| ||| |||||||| ||||| || ||||||| Sbjct 840732 ATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAAC 840791 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || ||||||||||| ||||| | || ||| | | || | ||||||| |||| Sbjct 840792 AACGTCTGATTTTTGCAGGAAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAATA 840851 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || |||||||| || ||||| | ||| | ||| | ||||| |||| Sbjct 840852 TCCAGAAAGAATCTACCCTCCATCTTGTACTTCGACTGAGAGGTGGTA 840899 Score = 141 bits (156), Expect = 1e-28 Identities = 181/249 (73%), Gaps = 4/249 (2%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | ||||||||||| || || | || ||||||| | | Sbjct 840900 TGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCAG 840959 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| |||||||||| || || ||| |||||||| ||||| || ||||||| Sbjct 840960 ATACCATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAAC 841019 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || ||||||||||| ||||| | || ||| | | || | ||||||| |||| Sbjct 841020 AGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAATA 841079 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT-- 146269 | || |||||||| || | ||| | ||| | ||||| ||||| |||| |||| || Sbjct 841080 TCCAGAAAGAATCTACCCTTCATCTTGTACTTCGATTGAGAGGTGGTATGCAAATTTTCG 841139 Query 146270 --GAAAATT 146276 ||||||| Sbjct 841140 CAGAAAATT 841148 Score = 136 bits (150), Expect = 6e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||||||| | || ||||| || |||||| | || || |||| | Sbjct 838846 TGCAAATTTTTGTAAAAACACTGACGGGAAAGACCATTACTTTGGAGGTGGAACCGTCTG 838905 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| |||||||||| || || ||| |||||||| ||||| || ||||||| Sbjct 838906 ATACAATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAAC 838965 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | ||||||||||| ||||| || || ||| | | || | ||||||| |||| Sbjct 838966 AGCGTTTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACCCTCTCAGATTACAATA 839025 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || |||||||| || ||||| | ||| | || || ||||| |||| Sbjct 839026 TCCAGAAAGAATCTACCCTCCATCTTGTACTCCGGTTGAGAGGTGGTA 839073 Score = 104 bits (114), Expect = 4e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | ||||||||||| || || | || ||||||| | | Sbjct 839074 TGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCAG 839133 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| |||||||||| || || ||| |||||||| ||||| || ||||||| Sbjct 839134 ATACCATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAAC 839193 Query 146152 AAAGACTCATTTTTGCAGGTAAACA 146176 | | || ||||||||||| ||||| Sbjct 839194 AGCGTCTGATTTTTGCAGGGAAACA 839218 >seq65953 Length=610 Score = 89.7 bits (98), Expect = 8e-13 Identities = 251/361 (70%), Gaps = 31/361 (9%) Strand=Plus/Minus Query 107226 tatatcatataattgtatatcatatttttcaacattaata-atgtt-atgtctatatatt 107283 ||||| || || || ||||| |||||| | | |||||| ||||| || | |||||||| Sbjct 369 TATAT-ATTTATTTCTATAT-ATATTTATTTA--TTAATATATGTTTATATATATATATT 314 Query 107284 gatatatgtaaatttttatctaatattagtatttcattataattaaatatatttttgtat 107343 || ||| || || ||||| || ||| |||| ||||||| || |||||| ||| ||| Sbjct 313 TATTTATATATATATTTATTTA-TATA--TATT-CATTATATATATATATATATTTATAT 258 Query 107344 a-atattggctgtaatttat-taaatattaaattatcatctatttCTAAGGTATCATCTT 107401 | ||||| | || ||| || ||||| | |||| || ||| | | ||| || Sbjct 257 ATATATTTATTTATATATATATATATATTTATTTAT-ATATATATATT---TAT----TT 206 Query 107402 TGatataataaattatataaagtattaattcatttctcattcga-atatta-ttaataat 107459 ||||| | | ||||||| | |||| || || ||| || | ||||| || ||| | Sbjct 205 ATATATATTTATTTATATATATAATTATTT-ATATCTTTTTATATATATTTCTTTATA-T 148 Query 107460 atttaaatatatagattctggcatataa-tctttatgtgataatatacatcta-atatat 107517 || || || |||| ||| | ||||| | ||||| | |||| ||||| |||||| Sbjct 147 ATATATATGTATATATTTATGTATATATGTATTTATAT----ATATTGATCTATATATAT 92 Query 107518 gat-ataGATGGATTTTCATTTAGAAATTTATTTATTTTATAATATATTGAATAATCTAT 107576 | || || || || ||||| | || |||||||||||| ||||||| | | || ||| Sbjct 91 ATTTATTTATACATATTTATTTATATATATATTTATTTTATTATATATTTATTTATTTAT 32 Query 107577 A 107577 | Sbjct 31 A 31 >seq77582 Length=1060 Score = 84.2 bits (92), Expect = 3e-11 Identities = 225/326 (69%), Gaps = 30/326 (9%) Strand=Plus/Minus Query 107270 tatgtctatatattgatatatgtaaatttttatcta---atattagtatttcattataat 107326 ||||| |||||||| |||||| || || ||||| || ||||| ||||| ||||| | Sbjct 314 TATGTATATATATTTATATATATATATATTTATATATGTATATT--TATTTATTTATATT 257 Query 107327 taaatatatttttgtataatattggctgta-atttattaa---atattaaattatc---a 107379 || | ||||| | |||| | | | || ||||||| | ||||| | ||| | Sbjct 256 TA--TTTATTTATATATATTTATAAATATATATTTATTTATATATATTTATATATATATA 199 Query 107380 tctatttCTA-AGGTATCATCTTTGatataataaattatataaagtattaattcatttct 107438 | ||||| || | ||| || | | ||||| | | |||||| ||||||||| |||| | Sbjct 198 TTTATTTATATATATAT-ATATAT-ATATATTTATTTATAT---GTATTAATTTATTTAT 144 Query 107439 c-attcgaatattattaataatatttaaatatatagattctggcatata---atc--ttt 107492 ||| ||| |||| ||||||| |||||| || | ||||| || ||| Sbjct 143 ATATTTATTTATATTTAAATATATTTATGTATATACATACATATATATATATATGAATTT 84 Query 107493 atgtgataatatacatctaatatatgatataGATGGATTTTCATTTAGAAATTTATTTAT 107552 || | ||| |||| || || | || |||| | || |||| || || | || ||||||| Sbjct 83 ATTTTATA-TATATATTTATT-TA-GATACATATTTATTTATATATATATATATATTTAT 27 Query 107553 TTTATA-ATATATTGAATAATCTATA 107577 |||||| ||||||| | |||| |||| Sbjct 26 TTTATATATATATTTATTAATATATA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784675887468080