Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq15337 197 3e-45 seq18639 89.7 1e-12 seq2214 86.0 1e-11 >seq15337 Length=1015838 Score = 197 bits (218), Expect = 3e-45 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||||| || || || | || || |||||||||||||| ||||| ||||| | Sbjct 840899 TACCACCTCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTG 840840 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||| ||||| || |||||||| ||||| || || | |||||||||||| | Sbjct 840839 AGAGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGG 840780 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || |||||||| || ||||||||||||||||| ||||| ||| |||| Sbjct 840779 GAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTA 840720 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || || || || ||||| | || |||||||| || ||||| Sbjct 840719 CTTCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 197 bits (218), Expect = 3e-45 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| || || || | || || |||||||||||||| ||||| ||||| | Sbjct 841127 TACCACCTCTCAATCGAAGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTG 841068 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||| ||||| || ||||| || ||||| || || | ||||||||||||| Sbjct 841067 AGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAG 841008 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || ||||| |||||||| |||||||||||||| ||||| |||||||| Sbjct 841007 GAATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTA 840948 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || || || || ||||| | || || ||||| || ||||| Sbjct 840947 CTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840899 Score = 190 bits (210), Expect = 4e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| || || || | || || |||||||||||||| ||||| ||||| | Sbjct 839073 TACCACCTCTCAACCGGAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTG 839014 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| ||||| | ||||| || ||||| || | | ||||||||||||| Sbjct 839013 AGAGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAG 838954 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || ||||| |||||||| |||||||||||||| |||||| ||||| | Sbjct 838953 GAATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTATCAGACGGTTCCA 838894 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | |||||||| || ||||| || |||| || |||||||| || |||||| Sbjct 838893 CCTCCAAAGTAATGGTCTTTCCCGTCAGTGTTTTTACAAAAATTTGCATT 838844 Score = 188 bits (208), Expect = 1e-42 Identities = 179/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||||| || || || | || ||||||||||||||||| ||||| ||||| | Sbjct 840443 TACCACCTCTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCG 840384 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||| ||||| || ||||| || ||||| || || | ||||||||||| | Sbjct 840383 AGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGG 840324 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || |||||||| || ||||||||||||||||| || || |||||||| Sbjct 840323 GAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTA 840264 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || || || || ||||| | || || ||||| || ||||| Sbjct 840263 CTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Score = 183 bits (202), Expect = 6e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | || || || | || ||||| ||||||||||| ||||| ||||| | Sbjct 840671 TACCACCTCTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTG 840612 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||| ||||| | ||||| || ||||| || || | ||||||||||||| Sbjct 840611 AGAGAGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAG 840552 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || |||||||| || ||||||||||||||||| || || |||||||| Sbjct 840551 GAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTA 840492 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || || || || ||||| | || |||||||| || ||||| Sbjct 840491 CTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCAT 840443 Score = 145 bits (160), Expect = 1e-29 Identities = 134/170 (79%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 82641 GATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGA 82700 || ||| | | ||| ||||| || ||||| || ||||| || || | |||||||||||| Sbjct 839242 GAGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGA 839183 Query 82701 GGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760 || || ||||| || ||||| |||||||| |||||||||||||| ||||| ||||||| Sbjct 839182 GGAATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCT 839123 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || || || || ||||| | || || ||||| || ||||| Sbjct 839122 ACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 839073 >seq18639 Length=1389233 Score = 89.7 bits (98), Expect = 1e-12 Identities = 134/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 144086 TAATTTACTAACATCTATAGTAAGAGCCTGGGATATAAATAAACCTCTTATTTTTTGCCC 144145 || ||||| |||| ||| ||| ||||||||||| || ||||| || || ||||| | Sbjct 485629 TATTTTACAGACATGTATTGTACGAGCCTGGGATCAGAAGAAACCCCTC-TTATTTGCTC 485571 Query 144146 C-GCTATGAATACCCTTATGTGGGAACATCCTATTACAGAAAAACATATAG-ATACTTTA 144203 | || ||||||||||| |||||||||||| || ||| | ||||| |||| || ||| | Sbjct 485570 CTGCCATGAATACCCTGATGTGGGAACATGTAATCACAAAGAAACAAATAGAATCCTTGA 485511 Query 144204 AAACATATGGGTTTCATAGAAATAGAATGTATAGaaaaaaaaCTAGCCTGTGGAGACGTA 144263 | || |||| | ||||||||| ||| | | ||| | ||||||| || ||| Sbjct 485510 CAGGATTCGGGTAT-ATAGAAATACCCTGTGTTGCTCGAAAGTTGGCCTGTGCTGATGTA 485452 Query 144264 GGAAA 144268 || || Sbjct 485451 GGTAA 485447 >seq2214 Length=644335 Score = 86.0 bits (94), Expect = 1e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||| |||||| || || || || || || || || || || || || || || || Sbjct 547417 ACCACCTCGCAAACGAAGGACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCTGA 547358 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | || || || ||||| || ||||||||||| | |||||| ||||||||||| Sbjct 547357 CAGCGTACGGCCATCCTCAAGTTGCTTACCAGCAAAGATCAATCTTTGCTGATCTGGAGG 547298 Query 82703 TATTCCT 82709 |||||| Sbjct 547297 AATTCCT 547291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979919192497486