Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq24522 120 7e-22 seq74122 91.5 3e-13 >seq24522 Length=437104 Score = 120 bits (132), Expect = 7e-22 Identities = 270/402 (67%), Gaps = 8/402 (2%) Strand=Plus/Minus Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 |||||||| || | ||||| |||||| | ||||| ||||| ||| | || | | ||| Sbjct 250450 TTTGCTATTTACTTAGAACCCTGGCATGCCGATATCTTTGACTTCCTTGAT-TGCAAAAA 250392 Query 110817 -AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGA 110875 ||| |||| || ||||| |||| || || || || ||||| | |||||| | || Sbjct 250391 GAATACAGGAAAGGATGAACAGCGAGCCCGAGACTTGTTCTATGCCCTCTGGATTCCTGA 250332 Query 110876 TTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTC 110935 | | ||||||||||| ||| |||||||||| ||| | | |||||||| || | Sbjct 250331 TCTTTTCATGAAACGAGTTGAAGAAAATGGTGATTGGACATTGATGTGTCCCAATGAATG 250272 Query 110936 TCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAA 110995 || || || || ||||| | |||||||| ||||||||| | || | |||||||| Sbjct 250271 CCCAGGCCTTTCGGATGTTTGGGGAAAAGAATTTGAAGACTTGTATATCAGTTATGAAAA 250212 Query 110996 AGAAGGCAAGTTTCGCAAACAAATTC---CAGCTCAAGAACTTTGGTTCAAAATCCTTGA 111052 || || || | ||| || || |||||| || | |||| | | | || Sbjct 250211 AGCTGGTAA---AGGTAAAAGAACTCTGAAAGCTCAGAAAGTCTGGTATGCAGTTATAGA 250155 Query 111053 ATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATC 111112 | | ||| |||||||| || ||||| || |||| || ||| | ||| ||||| Sbjct 250154 AGCTCAAACCGAAACTGGTACACCTTACATGCTGTACAAGGATTCTTGTAACCGCAAGAG 250095 Query 111113 TAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTG 111154 || ||| || | || ||||| || | |||||||| || Sbjct 250094 CAACCAACAAAACCTTGGGACAATAAAATGCAGTAATTTATG 250053 >seq74122 Length=500396 Score = 91.5 bits (100), Expect = 3e-13 Identities = 121/164 (74%), Gaps = 3/164 (2%) Strand=Plus/Plus Query 131465 ATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGAT 131524 |||||||||||| ||||||| | ||||||||||| |||||| | ||| | | || ||| Sbjct 189368 ATGTATAAGAAAGCTGTTGCTTCTTTCTGGACTGTGGAAGAGGTTGATTTATCAAAGGAT 189427 Query 131525 ATTGATGATTGGGAAAAATT-AACCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTTGC 131583 | | | ||||||||||| || || ||||| | |||| |||| | || | || Sbjct 189428 TTGGGCCACTGGGAAAAATTGAAAACTG-ATGAACAGCATTTCATTTCTCATGTCTTGGC 189486 Query 131584 ATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTA 131627 || || || | ||||||||| ||||||| |||||| |||| || Sbjct 189487 TTTTTTTGCTGCAAGTGATGGAATTGTTAATGAAAA-CTTGGTA 189529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1184506439240714