Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq15337 132 3e-26 >seq15337 Length=1015838 Score = 132 bits (146), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | || | || | ||| ||||| ||||| || || |||||||| || Sbjct 840670 ACCACCTCTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGA 840611 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || ||||| ||||| || |||||||||| |||||| |||||| | || Sbjct 840610 GAGAGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGG 840551 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| |||||| | || |||| || | |||||| | ||| | Sbjct 840550 AATACCTTCTTTGTCTTGAATTTT-GGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTA 840492 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| ||||| | ||||||||||| || |||||| Sbjct 840491 CTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCATA 840442 Score = 129 bits (142), Expect = 4e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| || | || | ||| ||||| ||||| || || |||||||| || Sbjct 840442 ACCACCTCTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGA 840383 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || |||| ||||| || |||||||||| |||||| |||||| | || Sbjct 840382 GAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGG 840323 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| |||||| | || |||| || | |||||| | ||| | Sbjct 840322 AATACCTTCTTTGTCTTGAATTTT-GGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTA 840264 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| ||||| | ||||| ||||| || |||||| Sbjct 840263 CTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCATA 840214 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| || | || | ||| || || ||||| || || |||||||| || Sbjct 840898 ACCACCTCTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGA 840839 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || |||| |||||||| |||||||||| ||| || |||||| | || Sbjct 840838 GAGAGTACGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGG 840779 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| |||||| | || |||| || | ||| || | || | Sbjct 840778 AATACCTTCTTTGTCTTGAATTTT-GGCTTTTACATTTTCAATGGTATCTGAAGGCTCTA 840720 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| ||||| | ||||||||||| || |||||| Sbjct 840719 CTTCCAATGTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCATA 840670 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| || | || | ||| || || ||||| || || |||||||| || Sbjct 841126 ACCACCTCTCAATCGAAGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGA 841067 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || |||| ||||| || |||||||||| |||||| |||||| | || Sbjct 841066 GAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGG 841007 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || || | |||| || | ||| || | ||| | Sbjct 841006 AATACCTTCTTTGTCTTGGATCTT-TGCCTTTACATTTTCAATGGTATCTGAAGGTTCTA 840948 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| ||||| | ||||| ||||| || |||||| Sbjct 840947 CTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCATA 840898 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| || | || | ||| || || ||||| || || |||||||| || Sbjct 839072 ACCACCTCTCAACCGGAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGA 839013 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || ||||| ||||| || ||||||||||||||||| |||||| | || Sbjct 839012 GAGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGG 838953 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || || | |||| || | || || | ||||| Sbjct 838952 AATACCTTCTTTGTCTTGGATCTT-TGCCTTTACATTTTCAATTGTATCAGACGGTTCCA 838894 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || || || || || | ||||||||||| || ||||| Sbjct 838893 CCTCCAAAGTAATGGTCTTTCCCGTCAGTGTTTTTACAAAAATTTGCAT 838845 Score = 82.4 bits (90), Expect = 5e-11 Identities = 123/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 33580 GAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGC 33639 ||||| || || | || |||| ||||| || |||||||||| |||||| |||||| | Sbjct 839242 GAGAGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGA 839183 Query 33640 GGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTC 33698 || | |||||||||||| || || || | |||| || | ||| || | ||| Sbjct 839182 GGAATACCTTCTTTGTCTTGGATCTT-TGCCTTTACATTTTCAATGGTATCTGAAGGTTC 839124 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| ||||| ||||| | ||||| ||||| || |||||| Sbjct 839123 TACTTCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCATA 839072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328096381822080