Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq15337 125 2e-23 >seq15337 Length=1015838 Score = 125 bits (138), Expect = 2e-23 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||||||||| ||||| |||||||| ||| ||| || || | ||| Sbjct 840914 AAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCAGATACCATTGAAAAT 840973 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||| ||||| |||||||| ||| || || || | || || || Sbjct 840974 GTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAACAGCGTCTGATTTTT 841033 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || ||| |||||||||| | ||| | | |||||||| |||||||||| ||| Sbjct 841034 GCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAATATCCAGAAAGAATCT 841093 Query 206365 ACTCTTCACCTTGT 206378 || ||||| ||||| Sbjct 841094 ACCCTTCATCTTGT 841107 Score = 123 bits (136), Expect = 6e-23 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||||||||| ||||| |||||||| ||| ||| ||||| | ||| Sbjct 840230 AAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCCGACACTATTGAAAAT 840289 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| |||||||| ||| || || || | || || || Sbjct 840290 GTAAAAGCCAAA-ATTCAAGACAAAGAAGGTATTCCCCCAGATCAACAGCGTCTGATTTT 840348 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || ||| |||||||||| | ||| | | |||||||| |||||||||| || Sbjct 840349 TGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCGGATTACAATATCCAGAAAGAATC 840408 Query 206364 TACTCTTCACCTTGT 206378 |||||| || ||||| Sbjct 840409 TACTCTCCATCTTGT 840423 Score = 123 bits (136), Expect = 6e-23 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||||||||| ||||| |||||||| ||| ||| ||||| | ||| Sbjct 840458 AAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCCGACACTATTGAAAAT 840517 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| |||||||| ||| || || || | || || || Sbjct 840518 GTAAAAGCCAAA-ATTCAAGACAAAGAAGGTATTCCTCCAGATCAACAGCGTCTGATTTT 840576 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || |||||||||||||| | ||| | | |||||||| |||||||||| || Sbjct 840577 TGCAGGGAAACAGTTGGAAGATGGTCGTACTCTCTCAGATTACAATATCCAGAAAGAATC 840636 Query 206364 TACTCTTCACCTTGT 206378 ||||| || ||||| Sbjct 840637 AACTCTCCATCTTGT 840651 Score = 123 bits (136), Expect = 6e-23 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| |||||||||||||| ||||| |||||||| || ||| || || | ||| Sbjct 840686 AAAACACTCACAGGAAAAACCATCACATTGGAAGTAGAGCCTTCAGATACCATTGAAAAT 840745 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| |||||||| ||| || || ||| | || || || Sbjct 840746 GTAAAAGCCAAA-ATTCAAGACAAAGAAGGTATTCCCCCAGATCAACAACGTCTGATTTT 840804 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || ||||| ||| |||||||||| | ||| | | |||||||| |||||||||| || Sbjct 840805 TGCAGGAAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAATATCCAGAAAGAATC 840864 Query 206364 TACTCTTCACCTTGT 206378 ||| || || ||||| Sbjct 840865 TACCCTCCATCTTGT 840879 Score = 113 bits (124), Expect = 1e-19 Identities = 145/197 (74%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || ||||| || || |||||||| |||||| ||||| ||| | ||| Sbjct 838860 AAAACACTGACGGGAAAGACCATTACTTTGGAGGTGGAACCGTCTGATACAATTGAAAAT 838919 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--ATC 206301 |||||| |||||| ||||| |||||||| ||| || || |||| || || || Sbjct 838920 GTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGA---TCAACAGCGTTTGATT 838976 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 || || || || |||||||||||||| | || | | |||||||| |||||||||| Sbjct 838977 TTTGCAGGGAAACAGTTGGAAGATGGTCGTACCCTCTCAGATTACAATATCCAGAAAGAA 839036 Query 206362 TCTACTCTTCACCTTGT 206378 ||||| || || ||||| Sbjct 839037 TCTACCCTCCATCTTGT 839053 Score = 87.8 bits (96), Expect = 4e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||||||||| ||||| |||||||| ||| ||| || || | ||| Sbjct 839088 AAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCAGATACCATTGAAAAT 839147 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||| ||||| |||||||| ||| || || || | || || || Sbjct 839148 GTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAACAGCGTCTGATTTTT 839207 Query 206305 GCCGGAAAGCAGTTGGAAGATGG 206327 || || || ||| |||||||||| Sbjct 839208 GCAGGGAAACAGCTGGAAGATGG 839230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179524140309754