Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq20954 91.5 2e-12 seq20788 86.0 9e-11 >seq20954 Length=27819 Score = 91.5 bits (100), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| || | ||||| || |||||| || ||| |||| |||| ||| | Sbjct 13147 ATCTACAAAGTAATGAAGCAAGTCCACCCCGACAC---TGG--CATC-TCCAGCAAAGCT 13094 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||| ||||||||||| || |||| | || | | || ||| | Sbjct 13093 ATGTCTATCATGAACAGTTTTGTCAACGATTTGTTCGAAAGAATAGCTTCTGAAGCCAGC 13034 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || |||| | || ||||||||| || ||| | | || ||| | ||||| || ||| Sbjct 13033 CGTTTGGCTCACTACAACAAGCGTTCAACCATCAGTAGCCGTGAGGTGCAGACTGCTGTG 12974 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||| | | | ||| || |||| | ||||||||||| || || |||| Sbjct 12973 CGTCTGCTTCTCCCCGGTGAGTTGGCTAAACACGCCGTCTCTGAAGGTACCA 12922 >seq20788 Length=128613 Score = 86.0 bits (94), Expect = 9e-11 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| || | || || || |||||| || ||| |||| |||| ||| | Sbjct 5182 ATCTACAAAGTAATGAAACAAGTCCACCCCGACAC---TGG--CATC-TCCAGCAAAGCT 5235 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||| ||||||||||| || |||| | || | | || ||| | Sbjct 5236 ATGTCTATCATGAACAGTTTTGTCAACGATTTGTTCGAAAGAATAGCTTCTGAAGCCAGC 5295 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || |||| | || ||||||||| || ||| | | || ||| | ||||| || ||| Sbjct 5296 CGTTTGGCTCACTACAACAAGCGTTCAACCATCAGTAGCCGTGAGGTACAGACTGCTGTG 5355 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||| | | | ||| || |||| | ||||||||||| || || |||| Sbjct 5356 CGTCTGCTTCTCCCCGGTGAGTTGGCTAAACACGCCGTCTCTGAAGGTACCA 5407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7163181963923188