Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq15337 105 6e-18 >seq15337 Length=1015838 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||| | ||| | ||||| ||||| || |||||||| || | | || | ||||| Sbjct 840424 TACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAGAGAGTACGACCATCTTC 840365 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||| || || |||| |||||||||||||| || || | ||| ||||| || Sbjct 840364 CAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGAATACCTTCTTTGTCTTG 840305 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 || ||| ||| | |||| | |||||| | | ||| ||||| | || || | ||| Sbjct 840304 AATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTT 840245 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || ||||||||||| ||||||||| Sbjct 840244 TCCTGTAAGTGTTTTCACAAAAATTTGCATA 840214 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| || | ||| | ||| | ||||| ||||| || |||||||| || Sbjct 841125 CCACCTCTCAATCGAAGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 841066 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| |||||||| || || |||| |||||||||||||| || || Sbjct 841065 AGAGTACGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGA 841006 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| ||||| || |||||| || | |||| | || |||| | ||| ||| Sbjct 841005 ATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACT 840946 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || || | ||| || || || ||||||||||| ||||||||| Sbjct 840945 TCCAATGTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCATA 840898 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | |||||| | ||| | ||| | ||||| ||||| || |||||||| || Sbjct 839071 CCACCTCTCAACCGGAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAG 839012 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||| | |||||| || || |||| | |||||||||||| || || Sbjct 839011 AGGGTACGACCATCTTCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGGA 838952 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| ||||| || |||||| || | |||| | || || | | ||| || Sbjct 838951 ATACCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTATCAGACGGTTCCACC 838892 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | ||| || | || |||||||| ||||| ||||| |||||||| Sbjct 838891 TCCAAAGTAATGGTCTTTCCCGTCAGTGTTTTTACAAAAATTTGCAT 838845 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| |||||||| || || |||| |||||||||||||| || || | ||| ||||| Sbjct 839227 TCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTG 839168 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| || | |||| | || |||| | ||| ||||| | || || Sbjct 839167 TCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGATG 839108 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||| || || || ||||||||||| ||||||||| Sbjct 839107 GTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCATA 839072 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||| | ||| | || || ||||| || |||||||| || | | || | ||||| Sbjct 840652 TACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCTTC 840593 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | |||||| || || |||| |||||||||||||| || || | ||| ||||| || Sbjct 840592 CAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCTTG 840533 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 || ||| ||| | |||| | |||||| | | ||| ||||| | || || | ||| Sbjct 840532 AATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTGATGGTTTT 840473 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || ||||| ||||| ||||||||| Sbjct 840472 TCCTGTAAGTGTTTTTACAAAAATTTGCATA 840442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424148897341488