Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq74122 91.5 2e-13 >seq74122 Length=500396 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/202 (71%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 59893 TGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAG 59951 ||||| |||||||||||| | || ||| ||||| | ||||| || ||||| || | Sbjct 192007 TGTTCAATGCCATAGAGACAATGCCATGCA-TTAAAAAGAAAGCTGATTGGGCTTTGAAA 192065 Query 59952 TGGATGAGT--CCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAG 60009 ||||| | | || | ||| | || | ||| | | |||||||| | || |||| Sbjct 192066 TGGATTTCTGACAAGGTCC--CATATTCAGAGCGTGTTGTTGCTTTTGCTGGGGTAGAAG 192123 Query 60010 GAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGC 60069 ||||||| |||||||| || || ||||||||||||| | || |||||||| |||||| Sbjct 192124 GAATCTTTTTCTCTGGTTCTTTTGCTGCTATTTTCTGGTTAAAGAAGCGTGGTATCATGC 192183 Query 60070 CGGGCCTGAGTTTCTCCAACGA 60091 | || ||| ||| ||| || Sbjct 192184 CTGGTTTGACATTCAGCAATGA 192205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547484838118560